| Id Trinity | TRINITY_DN48076_c0_g1_i6 |
|---|---|
| Name Transcript | Ll_transcript_327159 |
| Sequence | AAAGAAGAATGAATGTGTCCCCTGAAAACAGAATCTGAAATTAGCGTTGTACTTGAGTTTGGTGTTGAATGATCATAACATCAGAGTTAGCAATGGAGAA GGAGAAAATGGATCTGAAGGATGAAGCGAACGGAGAAGAAGAAGAAGAAGAAGAAGATCCTTCATCATCGACACTTCTCGATCTCACCAGTTACCAACTC CACGATCTTGACTCGGTCGAGTTACCACTCACTCTCACCGAGTTAGACCTCACTTCAAATCGTCTTTCCACCCTCGACCCTCGCATTCAACACCTTTCCC TCCTCAACAAACTATCCCTCCGTCAAAACCTAATCACCGACGATGCCGTTTTACCCCTCTCTTCATGGACCTCACTCTCCCAACTCCAGGAGCTTGTGCT GAGGGATAATCATTTGAAGAAGATTCCAGATGTTACCATATTTAAGAAGCTTTTAGTTTTTGATGTTTCTTTCAATGAAATTACTTCTCTACATGGCTTG TCCTCTGTTTCCAACACGCTTAAAGAGCTCTATGTGTCCAAAAATGAAGTCCCGAAGATAGAAGAGATTCATCATTTTCATCAATTAAGCATTCTTGAAC TTGGTTCCAACAAATTACGGGTTAGTTATCTACTACACTCTATTTTACTGCATTATGAACAACAACAATGATGAGTAGAGAATAACTACTTAATTATAAT TTATAGCTGATGTGTGACACGACAATGTCATTCTTTTAGAGAGTGGATCAGGAAATATAGGTTGGTTGGCGAGATTTTCGAGCAGCAAGGTGATTAAGTT TTTTCCCTTTTGAGGTCATATGTTATATGTTTGGTGCTCGATGGAAGGTTCTAGATAGTTTCCTTAGGTAGGGAGTTTAGCTGAGATTAGGAGGTTCCTT GCCTAATAATGCGGCCTGCAGCTATTGCCTAATAATGCGGCCTGCAGCTATTGCCTAGAGTTGGCATGCCTAATTCAACCGAATGAGGGCTAGACTTGGA TGAACTCTCTTCGGCTCATCCTGCTATTGGGCCTACCGCCTACACGGCCCATGCGTGAGCAGAACTCTTATGTACATATTATATTCCATTCCATTGTGAC ATGTTTGGCAAATGCTGCCCCTTTTGCATGTTAATGAGTTAGTGAGTAGAATATGTGCTTCCTACATAGTACATAAGGCGTTTCATTGGCTATTGACGAT CTTACACATTTATTCTGAAATCGGTATTGAATGCATGTTTGACAACTCACTTCGGGTAGCATACCTCTCAGGTACCGTAGAAGTTCCCTACTTGCAGTAT TTAATGGAGCAAGACATGTGTGTGTTCTTATAGTTTCTCTGTATTTCTGATGGATTCAGGTGATGGAGAATTTGCAGAACTTGACAAATTTAGAGGAGTT GTGGCTTGGACGTAATAGAATTAAAGTTATAAATCTATGTGGTCTCAAATGCATCAAGAAGATTAGTTTGCAAAGCAATCGTCTCACTACAATGACAGGA CTTGAGGGTTGCATAGCGCTGGAAGAACTATATTTGAGCCATAATGGTATTTCAAAAATGGAAGGCCTGTCATCTTTAGTCAATCTCCGGGTTTTAGATG TATCATCAAATAAGCTAACCTCTATCGATGACATTCAAAACCTGATGCAATTAGAAGATTTATGGCTTAATGACAACCAAATAGAATCACTTGAAGGAAT TTCTGAGGCTGTTGCTGGTTCAAAAGAGAAGCTTACCACTATCTACCTAGAAAAGAACCCATGTGCTAAGTCACCCAACTATACTGCTGTGCTAAGGGAA ATCTTCCCCAACATCCAACAAATTGATTCTAATGTATTTTCTTAAAGAGTTTATTAGCTTCATCTGTTTTGAAAGAAAAAAAAACAGTAGCTTTGAAGCT TTGCCATTTAATATCCATTTGTAAGTTTTATATAAAATTTGTACACTTTAGCCATTGTAAGTAGTTGAGTTTTATATTGCACTATGATTAATGATGTGAA CCCTGTCATGCTTGCAGTTTCGGGCTTGAAAGATTGGTGATTTTCCTGCCCACCTGATTAAGAGAATTTGCTAAGCAACCATTGGACATTGTTGTGTGGC CTGACCATTGGTTCACGGTGGAATGAAGATACTTGTTCAATGTTTCTTGTTTAGCAGACCACATTTTGCTCTATTTATGTTTATTTGGCAACCAAATTTT GAAGTGACGTTTCTTTGCTGTGTTTTTTATTTTTCTTGCTACCTTTGCAGATGAAGATTTAGTTTAGTGATGGTCTAGATAGTCTTCCAAATTTGTTTGA CTGATTTAATCCATGACCCATTATTTATTGTTTGTCATATTACCATCCTTCCCTTCTAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_158003; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_327159
| Blastp | Protein phosphatase 1 regulatory subunit 7 from Mus with 36.36% of identity |
|---|---|
| Blastx | Protein phosphatase 1 regulatory subunit 7 from Rattus with 42.25% of identity |
| Eggnog | leucine Rich Repeat(COG4886) |
| Kegg | Link to kegg annotations (66385) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019446359.1) |
| Pfam | Leucine Rich repeat (PF13516.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |