| Id Trinity | TRINITY_DN48084_c2_g1_i14 |
|---|---|
| Name Transcript | Ll_transcript_326625 |
| Sequence | GGTCAACGGGATGTGTAATGGCTGAATTATTTCTTGGACAGCCTTTGTTTCCTGGAGAGAGTGGAGTTGATCAACTAGTTGAAATCATCAAGGTTTTGGG AACTCCAACCAGGGAGGAGATAAAGTGCATGAACCCAAATTATACTGAATTTAAGTTTCCGCAGATAAAACCTCATCCATGGCACAAGGTCTTTCAGAAA CGTTTACCACCAGAAGCAGTGGACCTTGTCTGTAGGTTCTTTCAGTACTCTCCCAATTTGAGATGCACTGCTTTGGAAGCTTGCATTCATCCCTTCTTTG ATGAATTAAGGGACCCAACCACCCGCCTTCCTAATGGCCGCCCACTTCCTCCTCTGTTTAATTTTAAACCTGAGGAACTATCTGGCATTCCCCCTGATGT CATCAATCGCCTTATTCCTGAACATGCTCGCAAACACAACTTATTTATGGCTTTGCACACCTAGCAACTTTTCTTTTTGTCACTTGTGCCGTCCATCTGA GAATGAATTCCACAGAAGAAAGAGTTTCTAAGGATATATCTTATGTCAAAACTTTCAATCTTTTGAATTTATAGTTTTATTCATGCTCACCAATATATAT ATATATTTATCTCAGATGTGTTACTGATGATTTTAGTATCATATCTGTCAGGTATGAGAAAATATATATTGTGTATACCACTTGAACTTGTTTTGTGTTG AATTTCCCTTTTCTTAGTTTAATTTTGATGCTCCCATCATATTAAGTTTTTAAATGTTATCTTACGTATGACTTTAAGTGATGTTCTTCATCCTCCACCA CCCATTGTTTCTAATGAGGCAATTAGTACTATTGTTTGTAATGCAATAAGTGATGTTGATGAATTAGTGTGAAAAAATCATGACTCAAGAAATAAGCAAT TACTCAAAATAAACATGGTAGCTTGCTCAACTCAAACGCATAATATATACATGAATCATCGGAAACTATTTGTAGGATCATGTAGGCAATTACTCCAAAT AAATACTTAATAATAAATTTTATGTAATTTAAGTTAAATTGGTTTTAATTATGTTTGTGTTGAGTACTTAAAAAAATAAATAGTGAAACCTAATTTTTGG AAGGTATGAGTAGATGAATAGTTGGGCAGGCACGTGATTGAAAGGTCCAAGTTGTATATATAGGTGAAGGATAGGGATATGATTGGGGATAGGGTTTAGG GTTCATATTTCTCTCCAATTCAATTCAATTCAATTCAAACAAAAATGGCTTCTTTTAAACACTCTATTGCTATTCCCACCACGGGTGAAGTTCATGTCAT AGTGGGTCCCATGTTTGCTGGCAAAACGACTGCACTTCTTCGTCGTATTAAATCCGAAGTTGATAATGGAAGAAATGTAGCGATGTTGAAATCAAGTAAA GATACAAGATATGCAATTGATTCAGTTGTTTCACATGATGGGATTAAATTTCCTTGTTGGGCTTTGCCAGATCTTATGTCATTCAGAGATAAATTTGGTC ATGAAGCTTATCAAAAGTTGGATGTGATTGGTATAGATGAGGCTCAATTTTTTGAGGACCTGTATGAGTTTTGCTGCAATGCTGCTGATAATGATGGTAA AATTGTCATTGTTGCAGGTCTAGATGGTGATTATTTGAGGTATTATATAGTTCATAGATAAATCTAGTATCCTTTTTCGATATAACCAACAATCTCTTCT CATCTTATGATTAAATAACTAATCCCTTTCGAGTTGCGTTGTTGTCCTTCCGAACAAGTATCGTTCTGACTAGGACTTTTGATTAGTATGATACAAATGC TTACTTTTCCAATGATGTTTGTGCATCAGGAGAAGCTTTGGGTCAGTGCTTCACATAATACCACTTGCTGATACTGTAACCAAGTTAACTGCTCGTTGCG AGCTATGCGGCAAAAGAGCTTTCTTCACTTTGAGGAAGACAGAACAGAAAGAAACTGAACTAATTGGTGGAGCTGATGTTTACATGCCGGTATGCCGAAA TCACTATGTGAACAGCCAAGTTATCACAGAATCTGCCAAGAGTGTCTCAGAATCTCATAAAGTCAACAAAGATTCCCTTCTTGTTGAGGCAGCTCCAGTT GTTTAAGGATGGTTAAGTATTTGTTTTTTTATCCTAGCATGTTGTTTGAGCCTAATGGGTTTTGTTCAACAAGTTATAGTTTGTTATGTCACTTTTCTGA TTCTGTATATATATTTATTACATTGGTACTCAAATTATATGAAGAGTTTATTCCTTATCTACTTGTTATGAGAATGTTTCTGTCATCAATCTCAGCTACA TTGTATAACATTTTCTTCTAGTATCTATCCACTTTTTGAAGTTTATTTTCAT BLAST |
| Tissue | pods |
| Gene name | LI_gene_158060; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_326625
| Blastp | Thymidine kinase a from Arabidopsis with 81.67% of identity |
|---|---|
| Blastx | Shaggy-related protein kinase kappa from Arabidopsis with 92.81% of identity |
| Eggnog | THymidine Kinase(COG1435) |
| Kegg | Link to kegg annotations (AT3G07800) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019440412.1) |
| Pfam | Thymidine kinase (PF00265.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |