Ll_transcript_326628

• Id Trinity: TRINITY_DN48084_c2_g7_i1
• Name Transcript: Ll_transcript_326628
• Sequence: GGAAGAGTTATAATTTATCCTTCATTATAAATACAAAGACACAAAGGTGTACCAGACATACTTGCATCGTCATTTGCCTGAATAATAAAATGAAAACATT TAGTTTGAACAATAAAAAACATTTGTCATATAATATTACATGTCCTATGATTATATACACTTGAGTAATACATTTATATATTCATTATATACATCTAGTG ATACCTCTACATTCCCTTCATATTCCTCATCCAATTCAAGTGTCTTGAGGACTCGACCAGCAAGAAGCCCAATGCAATAAGCTGTAAACAATTTTAAGAC ATTCCATCACAAAGATAACATTGTTGGTGCAATGATGGTATAGAGAAAAAGAGAGAATCAGGGTATAAACAAAGTACCTGAAACATAGTTTGTGAGGCCT ACATCAAGACCACAGTGAGGCTGTTTGTGTGCATATGCTGCAGCAAAGAACATTATCTCCAGCAATACTAGCAGATGTTATTTGTGCAACAATTTCCTTG TTCGTGTGCAATGCCCTTTCTTATCCTCTTTGCGATGAGTTGGAGGAATCTACTAATCATTTATTATTCTCTTGTTCAAAATCCTACTTGGTATCACAAG CGTAATACTCTAATTTGGTCTTACATCTATTTTGGCATACTGATGTTAAGACCCTATTCTCAATTCATGAGAATATGCTACAGATGGAGAGTAAGAAGAA AATATTGTGGGTGGCTATCTCGTTTGTTATAATATGGAATCTTTGGCATATTACGAATAAAATTGTCTTTGAAGATGGATGGTTCAACCTTGAGGAGGTT TTAGATTTTACTTTTTTGCATTCTTTGAGCTTATTCAATGCCCAATATCATAATTTTCAACATTCTTTTGTAGAATGGGTATGGCATCCATTAAATTGTC TTCTATATTGTTAATGTATAGAGATACAAGACTTCAAGTACATCATTGATTAGAGCAATGCTAAATCCTCCCAAAATTTGAAGCCTAAAATCCTCCTAAT AGTAAGTAAAACTATGCATTCAGTGGAG
• Tissue: pods
• Gene name: LI_gene_158066;
• Additional information: -

Expression of Ll_transcript_326628

FPKM

• PAB: 0.1
• PNAB: 0.6
• PS1: 0
• PS2: 0.2
• PS3: 0
• PW1: 0.2
• PW2: 0.3
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_326628

• Blastp: -
• Blastx: 60S ribosomal protein L5-2 from Arabidopsis with 42.17% of identity
• Eggnog: This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance (By similarity)(COG0256)
• Kegg: Link to kegg annotations (AT5G39740)
• CantataDB: Link to cantataDB annotations (CNT0000907)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019435824.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;