Ll_transcript_328130

• Id Trinity: TRINITY_DN48092_c2_g2_i2
• Name Transcript: Ll_transcript_328130
• Sequence: CTTATCTCATACGTAACAACAAAGATGAAGACGAGGAAGATGATGATGATGATGATTCTGAAGACCTTCAAGATATGATCATTAATCCATCCGACTCTCT CATCGTTTGTGCCCGAAATGAGGATGATGTCAGCGTACTCGAGGTTTGGGTACTTGAGGACACACACTCAAAGGATATGAACATGTTTATTCACCATGAG ATCATCATTCCCGCATTTCCACTCTCTACAGCTTGGCTCGATTGCCCCCTTAAAGGAGGAGATACAGGGAACTTCATAGCGGTTGGTTCCATGGAACCCT CCATAGAAATTTGGGACCTTGATGTTCTTGATGAAGTACAGCCCTGTGTCGTCCTAGGTGGCATTGTAGAGAAAAAGAAAAAAGGAAAGAAGAAATCAAT CAAATACAAAGATGACAGTCACACTGACTCAGTACTTGGTCTCGCGTGGAACAAAGAGTACAGGAATATACTAGCAAGTGCCAGTGCCGACAACACAGTA AAGATTTGGGATGTGGTTGCTGGGAAGTGTGACATTACAATGGAGCATCACACAGACAAGGTTCAAGCAGTAGCTTGGAATCTGCATGCACCACAAGTTC TTCTTAGTGGTTCATTTGATCATACTGTCGTTTTGAAGGATGGAAGGGTGCCAACACATTCTGGCTATAAGTGGTCAGTCACAGCTGATGTAGAGAGCTT GGCATGGGATCCGCACACTGAGCACTCTTTTGTGGTGAGTCTTGAAGATGGTCTTGTAAAGTGTTTTGATGTTCGGACTGCCAAAGCTGATTCCACATCT GAGCTGAGTTCCACTTTTACTCTTCATGCACATGACAAAGCGGTTACCTCAGTATCTTATAATTTGTCAGCACCTAATCTTCTTGCTACTGCATCCATGG ATAAAACGGTAAAGCTTTGGGATTTGTCAAACAACCAACCATCTTGCATAGCATCTAAGACTCCTAAAACAGGAGCTATCTTTTCTATTTCTTTCTCAGA GGACAATCCCTTCTTATTGGCTATTGGAGGATCAGAGGGAAAATTAGAAGTATGGGACACTCTATCTGAATCTGGCGTCTCTCGAAGATATGAAAAGTAC AACAAGAATAGACCTTAAGCTGTTTCACTTATACTCTTCCTTATTGTAACAAAACAATATAGCCCACCCGGAAGTTTCTTTTTCTGCCTCTTCATTTTGG ATTTTTTTATAACCTTTGAATCAAGAACTAAACTTCTGGGGCTCTTTCCTCTAGGACTCATCATACACATGTTAATTTTCAGTTTTTATTTATTTAAAGT TTATTAGCTTATAATTTTTATACTTTGCAATAAGAATAGTATATGTTTTTTGGTCTGTGTGTTAAGAGTTTTAGTCCATTAAATTAGGTTTGAAATTAAA CCATTGAATTAATCAGTTTATAAAATCTTTATACAACATTACTTTAACTCAGTTGAGATAACTCTGCATCAATCTTAACTTCTATTTTGTTTTGAAAAAA TAATTCAATTCTATCATTTTAACGAATTTTGGTTTAGCAAGTAGAACTTTCTTGGCTAGCAACTGAGATATAGGCATGTTTTCGCTTGATGTCTTATCTT GATTGGTACTACCATGAGTATCCTATTATTTTTTAGAAAAGAAATTAATCTCTTTCGAGTTTGTGGCTGTCATTTTCAACAAATGTTGCTCTCATGAATC GAACTCTCAACCTTGGAGATATAGTGGAGTCTTATATCATTAGATCAATGTTTTGTTGGTATTTTGATAGATGTGAATTGCAAGTATATATAGCATAACA TTTGAGGTTACCATGAAAATTGGGAGGGAATGAGAGTGAAAATGGACGGAAATGCATGCAAGTCCTTCCTACATTATCTGAACAACCCACCTTGGATTTG TGGTTCCAAAAATAACCATTTTGCAAATTAAAGATGTGATGAAGGGCCTTTTCAAGCACAAGGCTCGATCACCCGTTGAGCTTGTTCGCCATGCCCACCA ACTTCTTCTGTTTCTTGACACCAATACAAGTAGTCGTGAACATAAGCGTGAAGAAAAGTTATCAGAGCTAAGCAAGACGATATTGGAGATAAGGACTATT CTGTATGGAAATGGTGCATCAGAGCCAAACCCTGATGCATGTTCTCAGTTGACTCAGGAGTTTTTTAAAGAGGACACATTTCGCCTTCTTATCATCTCTC TTCCAAACCTTAAACTTGGGCCCCGCCAAGATGCTACCCATGTGATTGCAAACTTGCAAAGGCAGAGAGTTAATTCAAAACTAATTGCTTCTCACTACAT GGAAAACAATATAGACCTTGTGGATATTCTGATGCAAGGTTATGAAAAAGAAAGTGACGTTGCTTTGACATATGGTGCTGTTGCAAGAGAATGCATACGC CACCAGAGCGTTGCAAGACATGTCTTGGAATCAGAACACATGAAGAAGTTTTTTGAATATGTTCAACTACCAAATTTTGAAGTAGCATCAGATGCTGGTG CAACTTTTAAAGTTGAGTACGCTTATGATACCATATCTTTTAATTTCTAGTCAAGAATCTTTTCAAGTTCTGGTCGTTGTAGTTTATTTATTCTTTTACT TGCAAGAAAGTTCCAAAACATATCTATAATTTGTTTCAAGTATTTTTATGCAGACTCTATGTTATTCAATAATGGATAGTAATAAAAGATATAAATATGT AATATTGACATGCACCGATGTATCTATGTGCGGAACTCTTTATACTTAGAAAGAACTATGCTTTATGGCAATTTTTTAGTGTAAATAGATTCGGATACCT GAAACTGATAACAATAAATTGTGTAAATATGAATGCAACTTTTGTCAATGCTAGAGTCCAATTAAAATTGTTGTCAATTTATTTGTTTCTAATACAAAGT TCCCTGTTCACTATTTTGCTCTTATAGAAATTATTTATTTAGAATGAAAGCTTATACATTCCCCTTATTGATATACACAGGAACTATTGACAAGGCATAA ATCTACGGTTGCTGAATTTCTTTCTAAAAATTATGATTGGTTTTTTAAGGAATACAACTCTCTGCTGCAATCTACAAGTTATTTTACTAGAAGACGTGCG GTGAAGTTACTTGGAGATATGTTGTTGGATCGGTCGAATTCTGCAGTAATGGTTCGGTATGTGAGCTCATTGGATAACATGGTGATCCTCATGAATCTCC TCAGAGATTCTAACAAGACAATTCAGTTTGAAACCTTCAACGTTTTCAAGTTGTTTGTTGCAAATCAAAATAAGCCTCCTGAGGTTATCACTATACTTGT TACAAACAAGCCTAAGCTTTTGCAATTCTTATCCAATTTCAATAGCGACAAAGCGGACGAGCAATTTCAAGCAGACAGACGACAAGTAATTAGTGAGATA ATTACTCTTGGACAAGAAGTTCGACCATGCACATCTTTGGATGACTGTGAAGTTCAATGTTGAATACCTTCTGCACCAACTTTCACTTATCTTTTTCGTT TTCTTGAATCACACTTTTCCTATGTTAAATATCAAGATTCATTGGCTCCTATTTCTTTTATTTTGGTGGGTATCATACTTATGTCTATTGGGAATAATTA AATATATATAATTTTTCAAAAGTCAACTATTTTTTGAA
• Tissue: pods
• Gene name: LI_gene_158134;
• Additional information: details;

Expression of Ll_transcript_328130

FPKM

• PAB: 0.2
• PNAB: 0.7
• PS1: 0.1
• PS2: 0.3
• PS3: 0.2
• PW1: 0.4
• PW2: 0.3
• PW3: 0.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_328130

• Blastp: Uncharacterized WD repeat-containing protein C17D11.16 from Schizosaccharomyces with 40.39% of identity
• Blastx: Putative MO25-like protein At5g47540 from Arabidopsis with 62.37% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (SPBC1711.16)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019456056.1)
• Pfam: Anaphase-promoting complex subunit 4 WD40 domain (PF12894.6)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;