Ll_transcript_328152

• Id Trinity: TRINITY_DN48092_c2_g2_i7
• Name Transcript: Ll_transcript_328152
• Sequence: CTTATCTCATACGTAACAACAAAGATGAAGACGAGGAAGATGATGATGATGATGATTCTGAAGACCTTCAAGATATGATCATTAATCCATCCGACTCTCT CATCGTTTGTGCCCGAAATGAGGATGATGTCAGCGTACTCGAGGTTTGGGTACTTGAGGACACACACTCAAAGGATATGAACATGTTTATTCACCATGAG ATCATCATTCCCGCATTTCCACTCTCTACAGCTTGGCTCGATTGCCCCCTTAAAGGAGGAGATACAGGGAACTTCATAGCGGTTGGTTCCATGGAACCCT CCATAGAAATTTGGGACCTTGATGTTCTTGATGAAGTACAGCCCTGTGTCGTCCTAGGTGGCATTGTAGAGAAAAAGAAAAAAGGAAAGAAGAAATCAAT CAAATACAAAGATGACAGTCACACTGACTCAGTACTTGGTCTCGCGTGGAACAAAGAGTACAGGAATATACTAGCAAGTGCCAGTGCCGACAACACAGTA AAGATTTGGGATGTGGTTGCTGGGAAGTGTGACATTACAATGGAGCATCACACAGACAAGGTTCAAGCAGTAGCTTGGAATCTGCATGCACCACAAGTTC TTCTTAGTGGTTCATTTGATCATACTGTCGTTTTGAAGGATGGAAGGGTGCCAACACATTCTGGCTATAAGTGGTCAGTCACAGCTGATGTAGAGAGCTT GGCATGGGATCCGCACACTGAGCACTCTTTTGTGGTGAGTCTTGAAGATGGTCTTGTAAAGTGTTTTGATGTTCGGACTGCCAAAGCTGATTCCACATCT GAGCTGAGTTCCACTTTTACTCTTCATGCACATGACAAAGCGGTTACCTCAGTATCTTATAATTTGTCAGCACCTAATCTTCTTGCTACTGCATCCATGG ATAAAACGGTAAAGCTTTGGGATTTGTCAAACAACCAACCATCTTGCATAGCATCTAAGACTCCTAAAACAGGAGCTATCTTTTCTATTTCTTTCTCAGA GGACAATCCCTTCTTATTGGCTATTGGAGGATCAGAGGGAAAATTAGAAGTATGGGACACTCTATCTGAATCTGGCGTCTCTCGAAGATATGAAAAGTAC AACAAGAATAGACCTTAAGCTGTTTCACTTATACTCTTCCTTATTGTAACAAAACAATATAGCCCACCCGGAAGTTTCTTTTTCTGCCTCTTCATTTTGG ATTTTTTTATAACCTTTGAATCAAGAACTAAACTTCTGGGGCTCTTTCCTCTAGGACTCATCATACACATGTTAATTTTCAGTTTTTATTTATTTAAAGT TTATTAGCTTATAATTTTTATACTTTGCAATAAGAATAGTATATGTTTTTTGGTCTGTGTGTTAAGAGTTTTAGTCCATTAAATTAGGTTTGAAATTAAA CCATTGAATTAATCAGTTTATAAAATCTTTATACAACATTACTTTAACTCAGTTGAGATAACTCTGCATCAATCTTAACTTCTATTTTGTTTTGAAAAAA TAATTCAATTCTATCATTTTAACGAATTTTGGTTTAGCAAGTAGAACTTTCTTGGCTAGCAACTGAGATATAGGCATGTTTTCGCTTGATGTCTTATCTT GATTGGTACTACCATGAGTATCCTATTATTTTTTAGAAAAGAAATTAATCTCTTTCGAGTTTGTGGCTGTCATTTTCAACAAATGTTGCTCTCATGAATC GAACTCTCAACCTTGGAGATATAGTGGAGTCTTATATCATTAGATCAATGTTTTGTTGGTATTTTGATAGATGTGAATTGCAAGTATATATAGCATAACA TTTGAGGTTACCATGAAAATTGGGAGGGAATGAGAGTGAAAATGGACGGAAATGCATGCAAGTCCTTCCTACATTATCTGAACAACCCACCTTGGATTTG TGGTTCCAAAAATAACCATTTTGCAAATTGTACGTACATTCATTCAAATCCCATCACTTTATTTGAATTATATGGAAAAAACAAAATTACAAAACCCTAA TTACATTTGTTGTTGTAATTCATGAGATGAAGAAAGATGTGATGAAGGGCCTTTTCAAGCACAAGGCTCGATCACCCGTTGAGCTTGTTCGCCATGCCCA CCAACTTCTTCTGTTTCTTGACACCAATACAAGTAGTCGTGAACATAAGCGTGAAGAAAAGTTATCAGAGCTAAGCAAGACGATATTGGAGATAAGGACT ATTCTGTATGGAAATGGTGCATCAGAGCCAAACCCTGATGCATGTTCTCAGTTGACTCAGGAGTTTTTTAAAGAGGACACATTTCGCCTTCTTATCATCT CTCTTCCAAACCTTAAACTTGGGCCCCGCCAAGATGCTACCCATGTGATTGCAAACTTGCAAAGGCAGAGAGTTAATTCAAAACTAATTGCTTCTCACTA CATGGAAAACAATATAGACCTTGTGGATATTCTGATGCAAGGTTATGAAAAAGAAAGTGACGTTGCTTTGACATATGGTGCTGTTGCAAGAGAATGCATA CGCCACCAGAGCGTTGCAAGACATGTCTTGGAATCAGAACACATGAAGAAGTTTTTTGAATATGTTCAACTACCAAATTTTGAAGTAGCATCAGATGCTG GTGCAACTTTTAAAGAACTATTGACAAGGCATAAATCTACGGTTGCTGAATTTCTTTCTAAAAATTATGATTGGTTTTTTAAGGAATACAACTCTCTGCT GCAATCTACAAGTTATTTTACTAGAAGACGTGCGGTGAAGTTACTTGGAGATATGTTGTTGGATCGGTCGAATTCTGCAGTAATGGTTCGGTATGTGAGC TCATTGGATAACATGGTGATCCTCATGAATCTCCTCAGAGATTCTAACAAGACAATTCAGTTTGAAACCTTCAACGTTTTCAAGTTGTTTGTTGCAAATC AAAATAAGCCTCCTGAGGTTATCACTATACTTGTTACAAACAAGCCTAAGCTTTTGCAATTCTTATCCAATTTCAATAGCGACAAAGCGGACGAGCAATT TCAAGCAGACAGACGACAAGTAATTAGTGAGATAATTACTCTTGGACAAGAAGTTCGACCATGCACATCTTTGGATGACTGTGAAGTTCAATGTTGAATA CCTTCTGCACCAACTTTCACTTATCTTTTTCGTTTTCTTGAATCACACTTTTCCTATGTTAAATATCAAGATTCATTGGCTCCTATTTCTTTTATTTTGG TGGGTATCATACTTATGTCTATTGGGAATAATTAAATATATATAATTTTTCAAAAGTCAACTATTTTTTGAA
• Tissue: pods
• Gene name: LI_gene_158134;
• Additional information: details;

Expression of Ll_transcript_328152

FPKM

• PAB: 1.4
• PNAB: 2.8
• PS1: 4
• PS2: 0
• PS3: 0.5
• PW1: 1.5
• PW2: 0.6
• PW3: 1.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_328152

• Blastp: Uncharacterized WD repeat-containing protein C17D11.16 from Schizosaccharomyces with 40.39% of identity
• Blastx: Putative MO25-like protein At5g47540 from Arabidopsis with 64.2% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (SPBC1711.16)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019455241.1)
• Pfam: Anaphase-promoting complex subunit 4 WD40 domain (PF12894.6)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;