Ll_transcript_328163

• Id Trinity: TRINITY_DN48092_c2_g4_i4
• Name Transcript: Ll_transcript_328163
• Sequence: CTTATTTTGTTATTATCGAACAAAACAATTTTATTCCCAGGATTGCATATGCCATGAAAAATATTTTAATTTGCTGTTCACTGACGTTTTTTTCCTTTAC TTCTTTAGCTAAGCTGCTTCTCGGTGACGTTCTCAAAGATGGAACTCCAATTTCTGTCAACCCTCTTGTGATTTGGGCTTGGGCAGGACTCCTTATTAAT GCCATCAACAGCATTCCTGCTGGAGAGCTTGATGGAGGGCGAATTTCTTTTGCCATTTGGGGAAGAAAGGCTTCATCTCGCTTCACCGGAGTCTCAATTG TGTTGCTTGGACTCTCATCACTAATCAACGATGTAGCGTTCTACTGGGTAGCTCTCATATTCTTCTTGCAGAGAGGTCCAATTGCTCCCCTTTCTGAGGA AATAACTGATCCTGATCAGAAGTATGTTGCTTTAGGAGTAACAGTTTTGCTCCTAGGCTTGTTGGTATGCTTGCCCTATCCCTTCCCATTCACTGATGAA ACCCTCATTAGTTTCTAGCACCGATGATTGGTACTACATATTTTTGACAATTGTGAAAACCAGACACTATCGAAGTTGGTTCACATGGTAGGCAAAAGAA AAAATCAAAATCCAAAGTTTTAGGCTTCACACGTCCTGTTTTCTAATTTATTAGCATAAGGGCACTTTTTTTT
• Tissue: pods
• Gene name: LI_gene_158136;
• Additional information: details;

Expression of Ll_transcript_328163

FPKM

• PAB: 1.1
• PNAB: 1.1
• PS1: 0.7
• PS2: 3
• PS3: 1.5
• PW1: 1.8
• PW2: 1.8
• PW3: 0.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_328163

• Blastp: Probable zinc metalloprotease EGY2, chloroplastic from Oryza sativa with 72.99% of identity
• Blastx: Probable zinc metalloprotease EGY2, chloroplastic from Oryza sativa with 71.13% of identity
• Eggnog: Membrane-associated zinc metalloprotease(COG0750)
• Kegg: Link to kegg annotations (4325486)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019433533.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;