Id Trinity | TRINITY_DN48092_c2_g4_i5 |
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Name Transcript | Ll_transcript_328164 |
Sequence | AATGGGGGGAGAGAGAATGAAAAAAAAATGTTTGGTTAGGCTGTGGGACCCAAATAAGAATAAGAATGATTTTTTTATTGTGAGGAAAAGTAGATTTTGT TCTTATTTTATGGGAAATTGTAATAAATTACAAAATAATGTCTGGGTCCAAATAAAAATGAAAATTTTGTTTGGGTTATGTTAATGTTCGACTTAAAAAA TGAAGTTTGCAAAAATTTTATTGGCTTAGTTATGGTATGTGGATAACAGAGATGAAACTTCGATTACCAGTGTATTAGTGTTATCTACATGCAACTCGTT AAACTAGTATTTATATTCGGCTAGATTAAGGTCCCTATTCCCAAATGATGTCATGAAGGAGAAGCTTGAGTACAAATTAAAGGACAAAACTTAGAACACG TTCTTTGGGTGCTTGTGGTGTGAAACTATGTGTAATTGTATATCATTTTCTTATAAGTAGTCAATGAAAAAGATGATCAGATAATATAAGTACTAAAATA ACTTCATACCTGTTTTTTTACTAAATTAAGTTACTTGCTTATCATTGGGTGGCGGCTATAAAGGAAAGACTTGTCATGCATGATGGGGATATTTCAGCAA ATTAAAAACCAAGCAATTTTTTTAGTGAGTTATGTCTTAGTTAAATGAATCAAAATGAATATTCATTTTTATATGCACCCAAAAAGACATTGTAGAAAGA ATTTTTGCCACCGAGGTTGCACAAATATAAGGTCCAAGTACAGGTACCAACATAAGTTAGTAGCAAAACCGACTTGCACTTAAGTTATATCACCTCGTTC TGTTGCTTGACCAAAATTTAACCTAAAGTGTTTGAGTAGCAAATTTGAAAGAAAAAATAGGTACATACCTATGTGTCAGTGTATCCAAGAAGTATTGAAA CTGGAGTGCGGGTACAACAACCATTTAGGAGTGTGAAGTACCCATGCATCATACGTTGTCACTTGTGAGCTCTACAAGTTGGTATTTTGCTTGACAATGC GCAATTTCAAATTTTCCTAGGAGAAAGACACACATAAAAATGAAGAAATACAAGCTTTGCAAAATTCCTTTGAGCAAAATAGCCCTCAGCCTATAGATGC AGAACAACTAAACAAGTTCAGTGATGAAAATAAGGATCAAAATGATGTGCAGGAGAAAGACGCACATAAAAATGAAGAAATGCAAGCTTTGGAAAATTCC TTTGAGCAAAATAGCCCTCAGCCTATAGATGCAGAACAAGTAAACAAGTTCAGTGATGAAAATAAGGATCAAAATGATGTGCAGAGTGTTGATAGCATAG AAGTTGCCAGTGGATCACCTCTGCCAGGTGTGAAGCCTCGGCAACTGGGTGAAGCAATAAAGATTCCCAAGGAAACGATTGATATTCTGAAGAACCAAGT TTTTGGCTTTGATACTTTCTTTGTGACAAGCCAAGATCCTTACGAGGGTGGAGTGTTGTTCAAGGGAAACTTGCGAGGGAAGCCTGGTAAAAGTTATGAT AAGATATCAAAGAGACTGCATGATAAATTTGGAAATGAATACAAGTTTTTCCTTCTGGTAAATCCTGAGGATGATAAGCCTGTGGCTGTAGTGGTTCCCA GAACAACCTTACAACCAGAGACAACTGCTGTACCTGAGTGGTTCGCAGCTGCAGCTTTTGGACTGGTTACATTGTTTACCTTGCTGCTACACAATGTTCC GGTTTTACAATCCGATTTATTGTCAACATTTTACAATCTGAACTTGTTAAAGGATGGTCTACCTGGAGCCCTTGTCACTGGACTTATTTTGGGGATACAT GAACTTGGTCACTTCATAGTTGCCCAAAACACTGGAGTTAAGCTTGGAGTCCCATTCTTTGTTCCTAGCTGGCAGATAGGCTCTTTTGGTGCTATTACAA GGATACGAAACATAGTATCCAATCGTGAAGATCTGCTCAAGGTTGCAGCTGCTGGACCTATAGCTGGCTTTTCCTTGGGTCTTGTGCTTCTACTCTTGGG TTTTGTCTTACCTCCCAGTGATGGTATTGGCGTCATTGTTGATGCTTCTGTATTTCATGAATCATTTCTTGCCGGTGGTATTGCTAAGCTGCTTCTCGGT GACGTTCTCAAAGATGGAACTCCAATTTCTGTCAACCCTCTTGTGATTTGGGCTTGGGCAGGACTCCTTATTAATGCCATCAACAGCATTCCTGCTGGAG AGCTTGATGGAGGGCGAATTTCTTTTGCCATTTGGGGAAGAAAGGCTTCATCTCGCTTCACCGGAGTCTCAATTGTGTTGCTTGGACTCTCATCACTAAT CAACGATGTAGCGTTCTACTGGGTAGCTCTCATATTCTTCTTGCAGAGAGGTCCAATTGCTCCCCTTTCTGAGGAAATAACTGATCCTGATCAGAAGTAT GTTGCTTTAGGAGTAACAGTTTTGCTCCTAGGCTTGTTGGTATGCTTGCCCTATCCCTTCCCATTCACTGATGAAACCCTCATTAGTTTCTAGCACCGAT GATTGGTACTACATATTTTTGACAATTGTGAAAACCAGACACTATCGAAGTTGGTTCACATGGTAGGCAAAAGAAAAAATCAAAATCCAAAGTTTTAGGC TTCACACGTCCTGTTTTCTAATTTATTAGCATAAGGGCACTTTTTTTTCTCATTTAAATTGTTCAAAGCGTATAATGTTGGAACTAGAATAATAAGTTGG ATATCAATAGTAAAAATGTCATATATTGTTTGTTACATTGAATAATTAAACTCACAAGGGGGGTTTATGTGCTAAGCAAGTTTGAATATAGTGATTGTTG ACTTTCTTTAATGTCAAGAATTCAAGTCAACAAGAAATTACTTATGTGTGTTTTTAGTCAACAAGAAAGACCTCTAGGGACAATTAGTGTTTATACTGGT GTGGAGAAATCTGTAAGAAAAGGAAAAACAAATTTATTGTACTACTCTAACTAGTGGGGAA BLAST |
Tissue | pods |
Gene name | LI_gene_158136; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_328164
Blastp | Probable zinc metalloprotease EGY2, chloroplastic from Arabidopsis with 71.89% of identity |
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Blastx | Probable zinc metalloprotease EGY2, chloroplastic from Arabidopsis with 60.04% of identity |
Eggnog | Membrane-associated zinc metalloprotease(COG0750) |
Kegg | Link to kegg annotations (AT5G05740) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019433527.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |