| Id Trinity | TRINITY_DN48095_c4_g1_i7 |
|---|---|
| Name Transcript | Ll_transcript_326466 |
| Sequence | ATACATTCATTCATGATCTGGTGGGTTTGATACACTGCAAAGATATGAAAACAACTACCACTGCTACTGTTGAATTGACAGAAAAACTTGGTTTGAGGTG AGACTTAGAGGAAAAGTAGTTGATTATTTGTTTTTGGAAACCCTGTGATCTGCGGTTGCCATGGATGCTCCCATTCCACCAGGTATGCTACTTATAACAT CACCATTTTCATCTGTCCCCTGCTTCTCCTGCATCTCAACACAAATCATCTATTTTCTACACACCTACTATAATACATAGTATATAAGCAGAATCATAAA ATGTACGTACTTACTGGTGGAACATTTGATTGTGTACTGTTATCATAATCTTGGTTGGCAGAAAGACGAGGATTCAGATCTGCATGACCGCTTTTGTTAC TTATGAAATCAAAGTCCTCGGTTGGTGCAACTTCAGGAGCTTTCACTGAGGCAGGAAGATCATCATCCACCGTCGATCTATACGGATCGTCATCATCGTC GTCGTCATCATCATCATCTTTCACAAAATGCCCCAACACCTGTTTCAATATATAACATATGACATGATATGTAGAGATGATATAATTAGAAACAAGGAAA TATAATGAATGACCTCTCCACCAAGGGTCTGAGTGAGAACACGTTTCCCTCCTACACATTTGTCCTCATAAATGGAAGTGCCATCATTTCTAGCAATGTT AGTAGATGCCTTATGGCCAACAACACCAGCTCTCTCATTCTTTGCAGCTGCTGATTCCATAAGTGATGCAGGACCACCCTTTTGAGTATGTCCACCCATT ATTTGAGATTCCACTGATTGCACCGTCGCTGCATCTCTTGGTGTGATGGGTTTTGATGCTAACTCTCCACCCACTTCGAACACATCACCATACCTGATAC CTCCTTCTTTATTATTACCTCTCTTGGGCTGTTCCTGGCTCATCATGCTACTATCACTTTATTAGTTTCTATAGTGAATCCAAGTACCACCTTAAGGGGT TATATATATATATATATGGGTGAATAGGATGGATATATCAAAATCAAAAAGGCATTGTTATCCAAAATAGATGTATAAAGTAGATGGAAGCGGTGATGGA CAGTGTTATTTCATATTTGAGACATGTGGCCATTACTTGGCAACTTCTCACAATCCTTACTCACCTTCTATGCCACAACAATTTCTAATTCTGAATTACC AATTTCTCTGCTACACACTACATAACATAACATAACATTTCACGCAACTTTGATGAACCAAAATCAAATACAACAACATAGTAGTGCATACTATTAATGG AAAAATGGACTACTGTTGTACTTTGGACTCACCCAAATACACCATATTACAATATTACTTGGGCCATTATACAACCAATTTTTTTAATCCTATTTGGGTT TCATTTTATAACTCCACGTCTCCACCATTATTACGTTCAATGGCCCAACCTAGAATTAGGAATAGTTGCGCCACGTTACAGATCATGTCTCACATCAATG CTACCAAAAGTTGCGCCCAAGTAAGCAATCATAACTTAGAAGCTTGTATGAAAAAAGAAACTTAGAAGGTTGTATTAATGCGACCGTTACAAACACAAAC ACTTCGCATTATTATATTTCACTCTCTTCCCATAAACATACAAACACTACTTTCACTTTCAGATCCCTTCAATCAAACTCCATTCCTTTCCCATACAACC GTGTCCGAGGAAATTTTGTTTTGTCCTGGGTGGTGGTTTAATCACATTGTTCAGTTTGGAAGAAGATTTGTGTTTCTAACTATTACAACAACGTTTTACA TTGCTGGTTTTCTAGGACATTATCTGATACATTGTGCTAGGTTGTGGTGGTGAGATCTAGTAGAATAAACAACCTTAAAATCATTTTATACTGTTATTGT TACAATGGAAACACTTATTGTTATGTCACAACATCAGCATAGGAACCAATACTACAGCAGCACTAGGTCTAAGCTACAAGGGTCTTATTGTTCTTCACCT TCCAAAGACTTTAGGGTCATAAATTGCAAAACTTTTCAAAGAGGAAATGGTATTCTACCAACCCCATTTAAGTCTTATGCTTATTCTTCACCTGTAACCA AAAGAGCATCTTCATCAAAAACACCATCAGATAACAAAACCCTTTTCAAAACTAGTACTCCGAACAGCACCCCTGTTCCTATCAATGCCAAAGCTTGTAA AAAGGACACAACTTTGGTTGAGGGTCTCTCAGATAGCAAAACCCTTTGCAAAACTAGAACTCCACAAAGCACCCCTATTCTTATCAATGGTAATGCTTGT AAAATGGACACAGCTTTCTGTGATAGAAGCTTGTTGTTTTCAGAACTATGGGCTGGACCGACTTACATGAATTCACCACCACCTAGTTCTTTGCCTATAC CGAAATTTTCTGTTACACCTGCCAGGACTGTGTCTCTTGATCTATCTGGTTCCTCACCTGAGATTGAAATGCACTATCCGGTTGCCAAGTCCGTGCTGTC CTCCCCTTGCAGGGAGTGTTCCTCTTGTATGGTACACTTGTTTGTTAATGATGATTCTGCGACAAAGATGCTCTGTCGCATTCTCAATCTTAACTTGAAT GACGAATGAGATGAAGGGGGGGCATATTGAGTAAATAAGCCTTTTTTATGTATGCTGTTGGATTAGAGTTTTAGGTGTATATACAGTGATCAAATAAAAG TGTGAGTTTGTGTTACTTTCACTAATGGGGGTTGTGGGGAGCCCTTCACTATGATGATTGATGGCTATGGTGGGTTGTCATTGTTGTAAATTGGATAGCT TAGACATGTGGAGAGAGTAAATGGTCCTTTCTTTAAGGCTGTTTTGGGAGAAGGGTTTGATTGTGATGTGTATAGAGCCTGCTATGAAAATAGTTGGGAA GCAGAATGGTGGTGATAATGGTGAGGAGGAATGTTGAGAATGGCCTGAATCACGAGTTCATAATATGTAGTTCATACTTCACATTATCCTTCCCATAGCG TGCTTTACTTTTAATCCAACAAATGATTTAGGTCTCTTATTTTTAGTACATACTGTAGATTGTAGAACTCTTCACTTATAACTCTTTAGAGCTCAATACT TGTGTCCTTGTTTTTCCTTTCAATTCTTTCTTTTACCTTTGTCCTTAATCATTCTGTTCTAATATGTTTACACATTCTAATTAGTGATCTTCTGCGTACC TGTTAGTAGTTACTACTTACAACCTTGCCTACTGATCCTCTATCTTTCTTTCCCAAAGTTAACTCCCATTTCTTAGCTTCCCTGGTTTGTCCCTTCACTA CCTTTTCTATTTTTATCAAACGAAAAGGTTGAAGGGCTTTAGTTATAACTTATAAACTTTTATGGTGTCTGCTTAGTTTTTGGGCTAATTCTTATCACAG TACTTGTTAGTAAGCCCTTGATATTTTCCATTTTCGGTATTTGTTAATGCTTCTTTCACCTGCCTTACCTTCCAGTTCCATTGAGAGTGTTGACAATACC ATACCAATACCATAATTAAGGTTGGCTAAACTGTGCTGAAGCTGTTTTGTTCAAGAGACGTGATGATGGTCTTGTGAGTTATTAGCTCCATTGCAAGCTT GTTTTTCTTCATGAAGTCCCTTATGGCTCATAAGCTTTTCTGTGCATTTGGTTAAGTAAAATTTCATTGACTATTATCTACGGACCACGTTATTGTTATA CATGAATGGAGCACTATATTCTCTTCACTAATTTTAACTTATGTGGTGTTACTTTAAACTATGACGACTCTTGACTAAATTATGTTGAAGGAATTGTATT TTCATATCTCTTGTTGATATGATTGCTTGTTGATCTTAATAAACTTAATTTGTCTCAGCATTGATTGGAATATGGAATATAAAACTTCTTCATTAATGAT TCTTGTACATAATGTTTTTCCCATGAGTTGTGATATTTGTAATCTCTCTAGGACTTTAACTCACTCATTTCTCTCATTCTCTGTTCTGGATCTCATCTTA GATGATTATGTGTTCATACTTCTCATACTATCATGGATATAAGATGGTTGCATGGCCCTTTCTCTTCAAAAACTCAAATAGTTGTTGGATATTCCAAGTA TGAAGAAGAATTCTCATATTGTGTAGAAGTTTGATGAGTTAGAGAGCATATAAGTGAATGAACGCATAGGCCTAATGCCTTAAGGGTGAAGACATGTATC AAGCCCACATATATGAACAAAATATCCTATTAGTGCATACAAGGACAAGAGAAAGTATATTTTCCAGGGAGTAATATATTTTTGGTAGCTTTATATTTCC AATGGTATATGTTCCACCTAAAATGAATGTACTTGCTCTGAGAATTGTCCCATACAGCCTTGCCTAGAAAACTTTATGTGATGAAGACCTTTACAATCAG TTGCATTCTTATGATAATTGAATAATTGCAGCTGTTTTGGTTGAGTCTCAACAGATTCATGCACATAAAATTTCATAACAGCAATATAAAATGTGAAGGC TAGAGGCAGTTCATTTCTTGTAACAAAGAGAAGTGTGATAGATGAAAGTGATTGTCTCTGCTAATTTGATTAAGGGGCGTTTCAAAGTTTTGTCAAATGT GAGATGCCTTATTTCATTTTTGGGCAATACATTACTTATACATTTCATATTTATGTACTTGTATTTTGGTGATAGTACACATTGCAAACATAATGCCAG BLAST |
| Tissue | pods |
| Gene name | LI_gene_158168; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_326466
| Blastp | - |
|---|---|
| Blastx | Late embryogenesis abundant protein D-34 from Gossypium with 47.86% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019456884.1) |
| Pfam | Proline-rich nuclear receptor coactivator motif (PF15365.5) |
| Rfam | - |
| GO | - |