| Id Trinity | TRINITY_DN48099_c3_g5_i2 |
|---|---|
| Name Transcript | Ll_transcript_326038 |
| Sequence | TTCTCTGACTTTGATGCATGCAAGAGGAACATGGTTCTCAAAAATAAAATAAAAATTCTCTTTTGAAATCAAAGGAAATAAATAAAATGTGAAAGAGAGT GATGTCTTATGCAAAATTTGGTCTTTTGTTGCTGATGTTCTTCACTGCAAGGTTTCTGCATTTGGGTCTCTCTGCTTGAATCAAACAAGGAAAGATGGTT TTATCAGTTGAAAGAGGAATGGGGGATTAGAGAATGCTGAAGAAGAGAAAAGGATCATATTCGGAAGATTTGTGATCTCATGGCTGATTCTTCATCGAAA TTCTCTTTACCTTGTAATACATTAAGCCCAAGACACAGAAGCTTCTCATTTTTTCAAACCTCTGGGTCTAGGATAGGGGCTGGTGCTAAAGCTTTACCGG ATTCTGAATCTGTTTGGAGCCCTACATCTCCTCTGGATTGCAAACTCTTCTCGAATCTTAGCAACCCTTTTAGCGTCAAGTCCCCTCGACCGTCATTCCA AACCGTGCATAAGAAGCAGTTGGATTGCAGTGAAGTAGGCCTTCGCATCATAAGTTCCCTTGTTAATGAAAACAAACTCAATGATGAGATTCTTCGTAAA TTTCAGAGGAAAAACATAATTCATGGACCGCGAGTTAAGACTGGCATACTTAACCTCTCAATGAACAGCCATGAAACTCTTGCACCTCATTTGAAATTTA GTTCCTTGCCCAAAAACTATGTAATTCCACTCCCTTCTGAAACCAAAATTCCGAAATATGAAGGGGTAAGCATTGACGATGTCTCTAGAAAGAAAGAGTT CAGTGTGGAATCTGAAGCCTTCGCAAGTTTTATGACTTCTTTGCCTGATTCCTCCGCGCCTTCTTCTTCATTTATCAACTCAAACCAGACCTCCAATTTG GAAATCAATGATTTATGTGTAGAAAATACACCTACGATAATGAGTTTGCCTCCAGCGACATGCAGAAGTTTGCAACTCGATTATTCGTTGAAAACTAGAT CTAGTTCACTTCCAATATCCATTGATTTTAGTAATGGATATGTAGGCCCACTCTCTGCAAGAGAGATAGAGCTATCTGAGGATTATACTTGTATAATTTC TCATGGTCCAAATCCGAAGCGAACACATATTTTTGCTGACTGCATTTTGGATTGTCAAAAAAATGACTTTTCCGAGTTCGTCAAGAAGGAAGCACCTGCT TTCAGAGATTCCGAAGTTTCTACATTTTCAGAAGGATCAACCTGTCCTCACCCCTCCGATAATGTTTTGAGCTTTTGTTACTCATGTAGTAAGAAATTGG AAAATGAGGAAGACATTTACACACACAGGGGGGAGAAATCATTTTGCAGCTTTAACTCTAGATCTGAGGAAATTTTGGCTGAGGATGAGGAATTGGAGAA AACATATGCAAATCCAGCAGAGAGCTCTTCAGACACAAGTTACCATGATCTTTTCCTCACTGGCCTGCATTTGTCCTAATAACATGCTTTGTTCATTTTC TTGAGAGACAATGTCCAAGCTATGGAATTGTTCTAAAGATAAAAGGTGTGGATAATTTAATGCTGTTTACAAACATTTGCCTGTGTGAATCTGTTTGTAA TATGGATATGTGCTATGTAAATTGTGCAGTGTTGTGGTTGTCCAGAATCAATTTTCATGGTTCAGTGAGTTAAAGCTAGAAAATGCAAACTTTATCTCTT GTGATAACTCTTGAAACAGATATATGCATTGTAATGTTCACTTTATGAGTTGAAAGAGGCCACAAGCCCTTCCTCATCAAACTCCTTTTCTATATATATA TATAATTATCTTTCACCTTAAAAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_158202; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_326038
| Blastp | Protein MARD1 from Arabidopsis with 35.48% of identity |
|---|---|
| Blastx | Protein MARD1 from Arabidopsis with 35.96% of identity |
| Eggnog | Protein of unknown function (DUF581)(ENOG41105YW) |
| Kegg | Link to kegg annotations (AT3G63210) |
| CantataDB | Link to cantataDB annotations (CNT0001730) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019436418.1) |
| Pfam | zinc-finger of the FCS-type, C2-C2 (PF04570.13) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |