Ll_transcript_326042

• Id Trinity: TRINITY_DN48099_c3_g5_i3
• Name Transcript: Ll_transcript_326042
• Sequence: AATAAATGAAAATGATGTATACGGTAGAATAGACATTGGCACTGTATTATACGTATTTGGAGCTCTCAATCATGGAAGGGGATGAGAAAGACAGAAAGAG AGAGTAGTACATAGTAAGACTCAGTAGTTCCCTGTTCTTTGACTTTGATGTATGCAAGAGGAACATATTTCTCAAAAATATAAAAATATAAAAATATCTG ATTAAATGAAAGGAAAAAATGTTAAAGAGTGTGATATCTTATGCAAGTTTTAGTCTTTTGCTGCTGATGTTCTTCACTGCCAAAGTTTCTGCATTTGGGT CTCTCTGACTGAGTAAAAATAGGTGGGTTTGACACTATTTTTGTCTGCTTTTCGTTTTTTGGTTTCTGATCAATCTGAACCATTAATTTCTATGGATGAT TTGGGTGCTCATTTTGGAGAATGTGTAAACAAAGTTTGTTTTTTGGGTAATAATCATAGACCCTGTTGTGAGATTGATTTATTAGATTTTGTGTTTGGGG TTCTATGTTCTATAAGCTGATTTTTCTGTTGATTTTTGAGCATTTGATAAATTTTCTGTTCTATTTTAATGTCTTTGGAAAAGCTTTTATCTGATCAATT GTTCAATTTCTCAAGAGATTTGTCATCCTAAATTTTAACAGTGTAGATGGATATTCCTCTTCTTGCAGCAAATATCACTTCAATAGGAAGTGGAAATTAT ATATGGATGTGCAGATTATTTTGGTTAAAGAAGCATTCAACCATTACTACTGCTTCCACTTATGGTATCTCTGTGTGTGTATGTGGAAAATAACTGTTTC TGTGGCTAAATGAATAAGCAATTTTTTATGCCATGTTTAGTTTTTGTTGTGAATTTTGATCATCGTTCGATTTGACTGGGAATTAAGAAAATGTTTTTCT TTAGCCTTTTGAATTTGATGCAGAAAGGAAAGATGGTTTCATCATTTTAAGAGTTGTAAGGGAATAGACTAGATAATGCTGAAGAGAAAAGGATCATATT TGGAAGATTTGTGATTCTCATGGCTGATCCTTCTTCCAATTTCTCTTTACCTTGTAATACATTAAGTCCAAGACAGAGAAGGTTCTCATTTTTTCACACC TCTGGTTCTAGGATAGGGGTTGGTGCCAAAGTTTTACCGGATTCTGAATCCGTTTGGAGTCCGACATCTCCTCTTGATTGCAAACTCTTCTCAAACCTTA GCAATCCTTTTAGTGTCAAGTCCCCTCGACCCCTATTCCAAACCGTGCACAAGAAGCAGTGGGATTGTAGTAAAGTAGGCCTTGGCATCATAAGTTCCAT TGTTAATGAAACCAAAAACAATGATGAGATCCTCGGTAAATTTCATGGGAAAAATGTTATTTTTGGACCACAGGTTAAGACTGGCATCCGTAATTTCTCG ACAAACAAGCATGAAACTCTTCAACCTTGTTTGAAATCTTGTTCCTTGCCTAACAACTATGTAACTTCACTACCTTCTGAAACCAAAAATCACAAGTCTG AAGTGGTGAGCATTGATAATGTCTCTAGAAAGAAAGAGTTCATTGTCGAATCTGAATCTTTCACGAGTTCTATGACTTCTGTGCCTGATTCTTCCAGGGC TTCTTCATCATTAATCAACTCAAACCAGACTTCCAATTTGGAAATCAGTGATTTATTTGTAGAGAATACATCTACAATAATGAGTTTGCCTCCAGTGACA GGCCGAAGTTTGCAACTAGATTATTCATTGAAGACTAGATCTAGTTCACTTCCAATTTCCATTGATTTTAGTAAAGGATATATAGGCTCACTCTCTGCAA GAGATATAGAGCTTTCTGAGGATTATACTTGTATAATTTCTCATGGTCCAAACCCGAAGCGAACACATATTTTTTGTGACTGCATTTTGGAATGTCAAAA AAGTGTCTTTTCTGAGTTCGTCGGGAAGGAAAAACCTGCTTTCGGATCTTCTAAAGTTTCTACGTTTTCAGAAGAAGAAACCCTTTACCCTTCTGACCAA GTTTTAAGCTCTTGTTACTCTTGTAATAAGAGATTGGAAAAGGGGGAAGACATCTACATAATAAGAGATGAAAATGCAGTTTGCAGCTTTAACCGAAGAT CTGAGGAAATTTTTGCTGATGAGGAATTGGACAAAACATATGCTAACTCAGCAGAGAGCTCTCCTGACTCAAGTTACCATGATCTCTTCCTCACTGATCT GCATGTGTCCTAATAACATGCTTTGTTCACTTTCTTGAGAGACAGTATCCAAGTTATTATATTGTTGCAAATGTGAAAGATGTGACTAATATAATATGAT TTTCGAACATTTGCCTATGTGAATCTGTTTGTAATATGGATGTGTGCTATGCAAATCGTGCAGTGTTGCGGCCGTGGTTGTCAACACCTAGCGTGTGATT AAGGCTCGGTTGTTGGCCGAGTTAAAACTAGAAAAGGCACAGTTTTATCTCTTCTGTGCTTTGTATTGTTCAGTAGATGAGTTGAAAGAGGCCACATGCC CTCCCTCATCAATTTCCTTTTCTGTATATATTATCTTTTTCCTTAGCTTAAACTTTATGAACTCTTTGATTGATGCATGTTGCAAAATTGCCATTAAGAT TTTCATTTAACTATTGTAGCTTGAATATTTCATTGTTTAGTCA
• Tissue: pods
• Gene name: LI_gene_158202;
• Additional information: details;

Expression of Ll_transcript_326042

FPKM

• PAB: 0.4
• PNAB: 0.9
• PS1: 0.5
• PS2: 0.2
• PS3: 0.4
• PW1: 0.9
• PW2: 1.2
• PW3: 0.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_326042

• Blastp: Protein MARD1 from Arabidopsis with 36.52% of identity
• Blastx: Protein MARD1 from Arabidopsis with 36.52% of identity
• Eggnog: Protein of unknown function (DUF581)(ENOG41105YW)
• Kegg: Link to kegg annotations (AT3G63210)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019457587.1)
• Pfam: zinc-finger of the FCS-type, C2-C2 (PF04570.13)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;