| Id Trinity | TRINITY_DN48101_c1_g1_i8 |
|---|---|
| Name Transcript | Ll_transcript_509269 |
| Sequence | TTACGATCAGTGTCACATCTTTCAACAGCACTAAACTACAGTTACCACCGCCCACCGCTATTCAACTTCTGTTTTGCCCTCGGTTTCTGCTTCTATTCCA ACTCCTCCTCACCTCAGAGCTCATTGTGAGTAGCAGTGGCAGCAAGTGACAGTGGGCAATGGCATCGAGCCTGCAGAAGATCGAAGGGGACGAGTCTGTC CTCTTACGGGTCACTCATTCTAATCTAAAGACTTTCACCGCTGACATTCGCTTCTCGCTTCAGCTGACGGTGGAAGCCGTGAAAGATAAGCTTTGGAAAA AATGTGGTACTTCTGTGAACTCGATGCACCTTGAGCTATATGATGATGCTCGCAACAAACTTGCTGATCTTAGTGATAATTCCAAACTCCTTGCATTATA TTCACCTCTAGATGGGTTTCGTTTGCATGTTTTAGATCTGGATCCGTCATCTGTCACTTCTGGTGGTTGGCTGGAAGATACTTCATTGGTGGAAAAATAC AAAATTTCTGATGAAGCCTATAATAAGCTAGAAGGCATGTTCCCCACCCCTTCTGTTTTGTTTAAACTTTCCCTCTTTTAAAACCTGTGCACATATGAAC AAATATCTGTTTAATGTACTTTTGGCATTGAATAATTAACTAAACCAGTATTTATCTTAATAGACAAAATCAACTTTTGTAAATATCAATGTAAATATAC TTAAGCAGACAGAACTTACCGTGATACAATTCTCCTGAGAGGGTGTTTAACTTTGACCATTCTAAAGAAGACAACACCAGAATAATAAAAACTGTTAAAT CAACACAATCAGAATAAAATTAAAACTAAAAAAATAAAGATTGAAGTAGATAAATGGAAAGGATGGAAAAAAAAAAGATTATGGCGAATAGCACCACAAC CAAGGAATGATGATAAGCCGATTTTGGAAGCTACAAGGTGGATTAGACCTTGATAAGCCCTAAGTTGGTTCACTCAAGAACCTAAGTGTGCACTCTCACA ATTCAGAAAAATCTTCAAATATATTTGTATTCTTGGTTGCCATTTCAGAATCATGAGGTTACACTATAAAGGCAGTTGTAATCATGTGAAGAGGCACCCC CTAACTCAGCCATTGATGCTGAAGTGAAATCTACAACTTATTACATCAACTTATTACATGGTTTAATGTTGTGACTCCGAAAAATATAAAAAGCCAAAAG CCAGTCCTGGCGATTAGCTGATAACTACATGTGGTCTTCCGGTTGTGGGACCTTAGACCATTATTACATAGGTTAAACAAAGAGAAAATGAAGACTCCCA AATTCCCATGCAAACTGGGAGAAACACGGACACATTGTACCTTGGTCCATGACTGTGTTTCGTGACCTGGATTCACGTTGGCCTCGGTGTGGTCCATGGC CATGGTTGGCCAAGTCCCTCCTTCTTCAATGCAATGCACCATCCTTGGTGGTAGCTCCTCTTTGCTTGGGCTGGTTTTCATTAGGGCCGTGACGACTTGT CAAAGTGCTTCCTTTGCCCTTTTGGTCCTTGATCTGGTCAGTGGTCCCCTAGGCCGTGGAGCTCTTTTTCCAGCTTGTCCTTTTCCACACTCACATCATA CTGGCTAGTCCATACAACACCATAGAGAAGTTGACCTTTTTCTAATCGCTTGATTTTAATCAAGTTACTCTTACTGGTCGTTCTGTTAGTAGGTAGGCAA CCTTGCTAGCTACCATTGTGTTGGCTGTCTACCACAATAGCAGAGTACATGGAACTAGTTGAGGGTAGAGGATTCTAGCTACTTGTTCTAATCAGTGATT CTGTCTATAAAATGAAAACAGTTTGCGTGATAGTGAGAAAACTTTACATTTGACAAAGAATAAGATGTATCATGATAGTACTAAGCATATTGATGCTTGA TATCATGTCATAGTGGATATTGTATCACAGGGTACTGTGGTTGTGTAGAATTTTTTTTTCTCATGTGCACCCATCAAATGTACTCTAAAGCTATAATCAC TAACAAGTTTAGGCACTGCCTGCACACAGCTGGAATTGTAGTAACCAAGAGTGTCCTTCCAATGGCAACTGCGGTGTGCTGAGTTGAATCTTTGTTGATG ATGGGGAAGAATACAAACAAAGGGGGAGAGTTGTGATAAAGGGGCTCGTAATTAAGTTTGGGAATGGCCTGATGTCTAACCATACCTGCAAAATTCTGTG GTGTAACCAAGGATTTGGCATGGAGATTAGCCGTGAAACAATGATCACCAATTTGTATTGGGATTGGGATTCGAGGGTTGATTGTTGGTTGACCTATCGC TCCTGGTGGTTGATATACATTAATTTGTCTGTTTCTCTTTTTCCTATTTTCTATTTGCACTCCTGTGTATAACAAACTCTTCAGACAGGTAAAGGTTGAC TATGTTTTGTGTGTCTTGTGAGCCTTCTATTTACAAAATTTTGTTTCGTTATTTTTATGTTTCATTTTTTTCTTTAAAAAAGTTAGTTCCTGTCAGCGTT TATTTAGAATCCTTCTATTCAAATAAGTACCTTTCAAACCAATAAAGGATACTATAATGCTGTCAAAATACCCTCTTGTCATTGAAAACTTTTTGGTCAA CATGTTTTATTAAGAAAATATAAATGATTTTAGTCATATTTACTTACTATTGGGTCTGGTTACTTTTATTTCGTTCATGTTTTTCATCATGCTTTTTCAG GCACATTTAGAAAATATAAAGAGAAATTGTCTTCCCAAATTCCATCAACTGTTGAGGCAACGATACCCGACAACTACATGGAAGATCTCTGTGCAAATAT CAAGGTTTGTCAATTATCATGCCTATACTTCTTTCTTCTTTCCTCTTCCGTATTTGCTTATATTCAGAGTTGTTTTGTAGTTTTTTGTCCTGTCTTCTTA ACATAGCTTTTGTATTATAGGGTTTAATAAGCTATTGTCAAAACGTAAATTCTCGAAATAGCAAGAATGGAGTTTTGGGGGGTTTCTGAAATCTGAGAGA GGTTCCTATGAGAAACTGTTACATTGTCAGGGATGGGTTAGCCTTACAAATTATCAATTTCATATTACTATTTTGATCATGCTGTTCATGGTGATCCAGA TATGTAATTTGAATTGCAATTTTCCGAGAAGAAAGTTTACTATATGTTCTATTTTTTAAATGTGATTCTAGTTACATTGCATTCTAAGCGCCATTCTCGA TTCTCCTAGTAGTTCTCCTTTTAACTTCTAATAAAAAATCTAGCTGTCTGTCTGTTTGTCGTACTTGGGGCTATATTCTTACCATAAATAAATCTTATTT CAGAAATCAATCTCATGTCTCCGTCTATCTCCTCAGTGTCCTTCCGAGTCCAAGTTTCTTGAATATTTGGGTGAATTTTAATGGTACTTATTTGTCTGAT ACCTTAAATCACATGTTATCCTTTCGATATCTTTGTGGTTTTGTATTGTTGAAAAAGTGATGTATTTTGCATTTTCTTGTTCATAGATAGTATCCTGATG TGTTTCAATCTATCATATCATCTAGTTCTGTGAATCTAAACTAATATATATTCTATGTGTCACCATACTCACCAATGCAAAATATTAAGGCGGGATCTAG GTGTGAGGTTGAACCTGGAGCAAAAAGGGGTGTTGTAAAATTTGTTGGTCGGGCGGAGGCATTGGGTCCTGGTTTCTGGGTTGGAGTACAGTACGATGAA CCATTGGGCAAACATGATGGCATGGTCAAAGGTGTACGCTACTTTGAGTGCCCTCCATCACATGGTGGAATGGTTAGACCAGAGAAAGTGAAGGTTTGTC ACAGTCCTTTTAATATTTGAATATGTTTCACTGCTAGTGGTGGTTCTTTTTTCCCTGATAAAAGAAGAAATTCAAAAAGATGGAGAATAAACTACAAAAT GGCCGGAGGATAATCTTAGAATGGCTAGACCTAACTCAACTCCAAAGTTTGTCCATATGACCTCACGCTCAGGACTAGACATTTGGAGCTTGGCAGGATT AGGCATCTGCGTGTGGCTCATATACCATTTTAGAATGGCTAGACTTAACTCAACCCAAAAGCTACCTCAGGATGAGGATTGTGTATGCCTTACAAATATT GGCTGAGCCATATTCCCATCGGATATGGGATTTATCTTAGTAGATAACAAATAATAATAAAACAATAAGGAAAGAAGAGGATATCATTCAAGTAAAGCTG CTCCATCCCTCAACATGTTAGGAACACTACTAAATGACAAATTGGATGTGCATGAGTGGAAGGATTTAGTATTGTATGGATTCATTTTGAGCATTTGTGC ATTTAGGGAAATGATGGTGGCCCTTAAGGGTCTATTTGTGAGTTGAGTTTTGGAAGGAAATGAAGGAAAATGGAAGCATTATGAGCTATGAAATACACTT GTGGTATGATTATGAAGCCTTCACTTTGTCTCTCTTCTCCTTCAAAACCTAACCGACAAACATATCCTAATTGTTTCTAATGGTGTGAATTAAGTTGTCA TTTCTTGAGATATTGGAGCAACTAAGGTTACGTTTTGGAGTTGAGGGAAAGAGAAAGGTTTTTTGGAGCCCTCTAAATGTTCATTTTCATGTATCCCTCA ATTTGAGATTTTTATACGGACCâBLAST |
| Tissue | pods |
| Gene name | LI_gene_158211; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_509269
| Blastp | Tubulin-folding cofactor B from Arabidopsis with 69.92% of identity |
|---|---|
| Blastx | Tubulin-folding cofactor B from Arabidopsis with 69.92% of identity |
| Eggnog | tubulin folding cofactor B(ENOG410YKGB) |
| Kegg | Link to kegg annotations (AT3G10220) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019428994.1) |
| Pfam | Ubiquitin-like domain (PF14560.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |