Ll_transcript_509227

• Id Trinity: TRINITY_DN48103_c0_g1_i10
• Name Transcript: Ll_transcript_509227
• Sequence: CTTGAAATGAAGTGGAGGCCCGTGTAGGGTTTTGGGTAAAGTTTATAAAAACCTAACTCACTATAACATTCCTTCACTCTCTTTCTCATTTGCAGCCGCC GCCACAGGAGCAACAATTGGAGTAGCCATGGCTTTGATCTTGCACGCCGCATCAACAAACAAAAACACTCACAAGACTCTGATTGCAGCAGAGTACAATG GTGTTCAAGTTCAGTTGGCCCCTAATTTTGAGATGGGTGTCTCAAACAAAACCCCTGAATTTCTCAAGTTGAACCCTCTCGGGAAGGTTCCTGTGTTGGA AACTCCAGATGGTCCTGTTTTTGAAAGCAATGCGATTGCACGATATGTTGCACGATTGAAGGGCAACGCCTCTTTGCTTGGATCTTCTCTCATTGAACAG GCTCAAGTTGATCAGTGGATTGATTTTTCATCACTGGAAATTGATTCTAATATCTTGAAAGTGCTCCTTCCAAGAGTTGGTTTTGCCCCATATCTTGCTC CAGTTGAGGAGGTTGCAAATGCTGCACTGAAGAGAGCATTGGGTGCATTGAACACTCACCTTGCTTCCCACACTTACCTGGTTGGACACACCGTGACCCT TGCTGACATTATAACAACCGCCAATCTGTATTTAGGGTTCTCTAAGGTCTTAGTTAAGAGTGTCACCTCAGAGTTTCCTCATGTTGAGAGATACTTTTGG ACCTTGGTCAACCAGCCAAATTTCAGGAAGGTATTAGGCCAGGTTCAGCAGACTGAAGCTCTTCCACCTATTCCATCTGCAAAGAAGCCTGCGGCCAAGG AAACAAAACCCAAAGCTAAGGAGCAACCAAAGAAAGAGGCTAAACCACAGCCAGAGAAGCCTGCTGAGGTAGCAGAAGAGGAGGCACCACCCAAGCCTAA AGCCAAGAATCCTCTTGATCTTCTCCCCCCTAGTAAGTTGATATTGGATGAGTGGAAGAGGTTGTACTCAAACACTAAGACTAACTTCCGTGAGGTTGCA ATCAAAGGTATTGCTATTCTACTACTTGTGGTTTTAAATTTTGTAACTTCTAAGCAAGGTTCTAAATTCTTATTGTGGTCGCGAAGATAAAAAATAGCAA GTGTTGCAGACAGTTGTTAAAAAATGTGTGGATGCGACCACTGTTATGTTTGCAGAAGCTGTGATATTGGAGTGGCAATAGTGGTTGTGGATCACTCTTT AGAACCTTCTTTGATTATGATTGCTATTATGTTTATCAAGTCTTGTTGCTTCTATTGTGAATACTGTAGTAAAGAATGTCTAGATTATCTGATTAGATGT ATTGGCTTATCATTTTAAAATCCTCCTTTTAACTTTCAGGATTCTGGGACATGTATGATCCCGAAGGATATTCTTTGTGGTTCTGTGATTACAAATACCA GGATGAGAACAGTGTTTCCTTTGTGACATTGAACAAAGTTGGTGGATTTCTTCAGAGGATGGATCTGGCTCGCAAGTATGCTTTTGGAAAGATGCTTATT ATCGGATCACAGCCACCATTTAAGGTGAAGGGGTTGTGGCTTTTCCGTGGCCAAGAAATTCCACAATTTGTGATTGATGAATGCTATGATATGGAGCTGT ATGAGTGGACAAAGGTTGACATTTCTGATGAAGCCCAGAAGGAACGTGTTAATCAGATGATTGAAGATTACGAGCCTTTTGAGGGAGAGACTCTTTTGGA CGCCAAGTGCTTTAAGTGAGAAGATAATCCCCCAGTTGAATTTGGTTATGGTTTTGTCATGTGTTTTTATTTTTTTGTAGAACTTCGTTTTTTCTAATTC CTACTTCTGTTATAGTGAAGCTTTAGCAGTGCTTGTTTTGACAATCTTGAAACAAATATTTTGATTTTGCTACAGAAAATGCTTTATTTGTTTGTTTGGT GTCTGCATGTATGAAATTATTAGTTGGGTTCAGAGGACCCAATTTCTACACATAAAAATTATTAGTTGGCAAATATACACATGCAAATCATTACTCAATG GATG
• Tissue: pods
• Gene name: LI_gene_158225;
• Additional information: details;

Expression of Ll_transcript_509227

FPKM

• PAB: 1.1
• PNAB: 6.9
• PS1: 2.4
• PS2: 6
• PS3: 4.5
• PW1: 2.8
• PW2: 3.5
• PW3: 4.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_509227

• Blastp: Elongation factor 1-gamma from Prunus with 69.46% of identity
• Blastx: Elongation factor 1-gamma 2 from Oryza sativa with 68.26% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019425292.1)
• Pfam: Glutathione S-transferase, N-terminal domain (PF02798.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;