| Id Trinity | TRINITY_DN48103_c0_g1_i12 |
|---|---|
| Name Transcript | Ll_transcript_509230 |
| Sequence | CTTGAAATGAAGTGGAGGCCCGTGTAGGGTTTTGGGTAAAGTTTATAAAAACCTAACTCACTATAACATTCCTTCACTCTCTTTCTCATTTGCAGCCGCC GCCACAGGAGCAACAATTGGAGTAGCCATGGCTTTGGTTAGTTACTTTCTTTTGTTCTTGTTATTCATCATCTAATCAACTCTGTTATAAAAATCTCAAC AATCTCGGATCTGTGTATAGATCTTGCACGCCGCATCAACAAACAAAAACACTCACAAGACTCTGATTGCAGCAGAGTACAATGGTGTTCAAGTTCAGTT GGCCCCTAATTTTGAGATGGGTGTCTCAAACAAAACCCCTGAATTTCTCAAGTTGAACCCTCTCGGGAAGGTTCCTGTGTTGGAAACTCCAGATGGTCCT GTTTTTGAAAGCAATGCGATTGCACGATATGTTGCACGATTGAAGGGCAACGCCTCTTTGCTTGGATCTTCTCTCATTGAACAGGCTCAAGTTGATCAGT GGATTGATTTTTCATCACTGGAAATTGATTCTAATATCTTGAAAGTGCTCCTTCCAAGAGTTGGTTTTGCCCCATATCTTGCTCCAGTTGAGGAGGTTGC AAATGCTGCACTGAAGAGAGCATTGGGTGCATTGAACACTCACCTTGCTTCCCACACTTACCTGGTTGGACACACCGTGACCCTTGCTGACATTATAACA ACCGCCAATCTGTATTTAGGGTTCTCTAAGGTCTTAGTTAAGAGTGTCACCTCAGAGTTTCCTCATGTTGAGAGATACTTTTGGACCTTGGTCAACCAGC CAAATTTCAGGAAGGTATTAGGCCAGGTTCAGCAGACTGAAGCTCTTCCACCTATTCCATCTGCAAAGAAGCCTGCGGCCAAGGAAACAAAACCCAAAGC TAAGGAGCAACCAAAGAAAGAGGCTAAACCACAGCCAGAGAAGCCTGCTGAGGTAGCAGAAGAGGAGGCACCACCCAAGCCTAAAGCCAAGAATCCTCTT GATCTTCTCCCCCCTAGTAAGTTGATATTGGATGAGTGGAAGAGGTTGTACTCAAACACTAAGACTAACTTCCGTGAGGTTGCAATCAAAGGATTCTGGG ACATGTATGATCCCGAAGGATATTCTTTGTGGTTCTGTGATTACAAATACCAGGATGAGAACAGTGTTTCCTTTGTGACATTGAACAAAGTTGGTGGATT TCTTCAGAGGATGGATCTGGCTCGCAAGTATGCTTTTGGAAAGATGCTTATTATCGGATCACAGCCACCATTTAAGGTGAAGGGGTTGTGGCTTTTCCGT GGCCAAGAAATTCCACAATTTGTGATTGATGAATGCTATGATATGGAGCTGTATGAGTGGACAAAGGTTGACATTTCTGATGAAGCCCAGAAGGAACGTG TTAATCAGATGATTGAAGATTACGAGCCTTTTGAGGGAGAGACTCTTTTGGACGCCAAGTGCTTTAAGTGAGAAGATAATCCCCCAGTTGAATTTGGTTA TGGTTTTGTCATGTGTTTTTATTTTTTTGTAGAACTTCGTTTTTTCTAATTCCTACTTCTGTTATAGTGAAGCTTTAGCAGTGCTTGTTTTGACAATCTT GAAACAAATATTTTGATTTTGCTACAGAAAATGCTTTATTTGTTTGTTTGGTGTCTGCATGTATGAAATTATTAGTTGGGTTCAGAGGACCCAATTTCTA CACATAAAAATTATTAGTTGGCAAATATACACATGCAAATCATTACTCAATGGATG BLAST |
| Tissue | pods |
| Gene name | LI_gene_158225; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_509230
| Blastp | Elongation factor 1-gamma from Prunus with 78.55% of identity |
|---|---|
| Blastx | Elongation factor 1-gamma from Prunus with 73.03% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019425292.1) |
| Pfam | Glutathione S-transferase, N-terminal domain (PF02798.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |