Ll_transcript_509236

• Id Trinity: TRINITY_DN48103_c0_g1_i15
• Name Transcript: Ll_transcript_509236
• Sequence: CTTGAAATGAAGTGGAGGCCCGTGTAGGGTTTTGGGTAAAGTTTATAAAAACCTAACTCACTATAACATTCCTTCACTCTCTTTCTCATTTGCAGCCGCC GCCACAGGAGCAACAATTGGAGTAGCCATGGCTTTGATCTTGCACGCCGCATCAACAAACAAAAACACTCACAAGACTCTGATTGCAGCAGAGTACAATG GTGTTCAAGTTCAGTTGGCCCCTAATTTTGAGATGGGTGTCTCAAACAAAACCCCTGAATTTCTCAAGTTGAACCCTCTCGGGAAGGTTCCTGTGTTGGA AACTCCAGATGGTCCTGTTTTTGAAAGCAATGCGATTGCACGATATGTTGCACGATTGAAGGGCAACGCCTCTTTGCTTGGATCTTCTCTCATTGAACAG GTTTTTTGTTGTTGCTTTTAACACTATGTTCCACGTACTCATTTCCTAGTCATTTAGTTAAGTTTAGTCTGCTAGTAACTTTTCATGTATTTATGCCAAA AAGAGCTATTTTTTCATTTGTGTGACTCCGATCTGTTTTCGTTGGTGTGACTCTGATTTGTTTTAATTTGTGTCACTCTGATCTGTTTAATTTATGTGAC TCTGATCTCTTCTAATTTGTGTGATTCTGATCTGTTCTAGTTTGTGTTATTCTGATCTGTTTTAATTTTTGTGATACTGTTATGTTTTCATTTGTGTGAT ACATTTGTGCTTTACCATACATGTTTCTAATTTTCAGGCTCAAGTTGATCAGTGGATTGATTTTTCATCACTGGAAATTGATTCTAATATCTTGAAAGTG CTCCTTCCAAGAGTTGGTTTTGCCCCATATCTTGCTCCAGTTGAGGAGGTTGCAAATGCTGCACTGAAGAGAGCATTGGGTGCATTGAACACTCACCTTG CTTCCCACACTTACCTGGTTGGACACACCGTGACCCTTGCTGACATTATAACAACCGCCAATCTGTATTTAGGGTTCTCTAAGGTCTTAGTTAAGAGTGT CACCTCAGAGTTTCCTCATGTTGAGAGATACTTTTGGACCTTGGTCAACCAGCCAAATTTCAGGAAGGTATTAGGCCAGGTTCAGCAGACTGAAGCTCTT CCACCTATTCCATCTGCAAAGAAGCCTGCGGCCAAGGAAACAAAACCCAAAGCTAAGGAGCAACCAAAGAAAGAGGCTAAACCACAGCCAGAGAAGCCTG CTGAGGTAGCAGAAGAGGAGGCACCACCCAAGCCTAAAGCCAAGAATCCTCTTGATCTTCTCCCCCCTAGTAAGTTGATATTGGATGAGTGGAAGAGGTT GTACTCAAACACTAAGACTAACTTCCGTGAGGTTGCAATCAAAGGATTCTGGGACATGTATGATCCCGAAGGATATTCTTTGTGGTTCTGTGATTACAAA TACCAGGATGAGAACAGTGTTTCCTTTGTGACATTGAACAAAGTTGGTGGATTTCTTCAGAGGATGGATCTGGCTCGCAAGTATGCTTTTGGAAAGATGC TTATTATCGGATCACAGCCACCATTTAAGGTGAAGGGGTTGTGGCTTTTCCGTGGCCAAGAAATTCCACAATTTGTGATTGATGAATGCTATGATATGGA GCTGTATGAGTGGACAAAGGTTGACATTTCTGATGAAGCCCAGAAGGAACGTGTTAATCAGATGATTGAAGATTACGAGCCTTTTGAGGGAGAGACTCTT TTGGACGCCAAGTGCTTTAAGTGAGAAGATAATCCCCCAGTTGAATTTGGTTATGGTTTTGTCATGTGTTTTTATTTTTTTGTAGAACTTCGTTTTTTCT AATTCCTACTTCTGTTATAGTGAAGCTTTAGCAGTGCTTGTTTTGACAATCTTGAAACAAATATTTTGATTTTGCTACAGAAAATGCTTTATTTGTTTGT TTGGTGTCTGCATGTATGAAATTATTAGTTGGGTTCAGAGGACCCAATTTCTACACATAAAAATTATTAGTTGGCAAATATACACATGCAAATCATTACT CAATGGATG
• Tissue: pods
• Gene name: LI_gene_158225;
• Additional information: details;

Expression of Ll_transcript_509236

FPKM

• PAB: 0.2
• PNAB: 0.2
• PS1: 0.6
• PS2: 1.2
• PS3: 0.7
• PW1: 0.7
• PW2: 0.3
• PW3: 0.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_509236

• Blastp: Elongation factor 1-gamma 2 from Oryza sativa with 88.52% of identity
• Blastx: Elongation factor 1-gamma 2 from Oryza sativa with 73.17% of identity
• Eggnog: glutathione Stransferase(COG0625)
• Kegg: Link to kegg annotations (4328752)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019425292.1)
• Pfam: Elongation factor 1 gamma, conserved domain (PF00647.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;