Id Trinity | TRINITY_DN48103_c0_g1_i19 |
---|---|
Name Transcript | Ll_transcript_509243 |
Sequence | GGGGTATGAGTGTAATTTACAGAATGAATGAATGAATGTAATCATCCTCGCCATGGAGCAATAGGGTATAGATGAATGTAATGTATTAAGGAAAAGAGTG AGAGTGAGCGAGTGAGTCCCACACTGTTGACGAAGATGGAAGGGTTTACACCATCTTCTTCTTCTTCTGATTCTTCTTCAATTTCTTCACTTCAATCTAC CATGCGTGCTTTCGAACTCGCTTGTACTTCCATCCAGATGCAAATGAATCCATCAGCATCCGAGGGAGTTATATCATCACTAGGACAATCCTCTCAACCA TATCACATTTGCCAATTCATCCTTCAAAACTCACTCCTCCCAACCGCAAGGTTCCAAGCCGCCGCCGCTTTTCGCGAAGCAGCCATCCGAGAATGGCCTC TCCTCACTCCTCAAAACAAGTCCGACTTCATTACCTTTTGTCTATCCTATGTCATGCAACATGCCTCTTCTCCTCACCCCTTTGTCCAAGCTAAGGTTTC CGCTGTCGCCACGCAGTTATTCAAAAGGGGATGGCTTGAACTTCTGCCAAATCAGAAGGACACCCTCTTTTATCAGGTTAACCAAGCTATTTTAGGCATT CATGGACTTGATGTGCAATTTGCTGGAATCCACTTCCTCGAATCTTTGGTATCCGAGTTTGCTCCGACTACTTCAAGTGTTATGGGCCTTCCAAGGGAAT TTCATGAACAGTGTAGGAGATCACTTGAGCTGGATTACCTCAAGACATTCTACCGTTGGACACAAGAAGCTGCTTCAAGTGTCACAGATAAGATCATTCA ATCTAACTCTGCTGTACCCGAGGTTAAAGTTTGCACTGCTGCGCTGGATCTTATGCTTCAAATTCTGAATTGGGATTTTCGTTGCAATACCAATGACACA AAAATAAATGCTGCAAATGTCTTCTCTGCTGGAGTTAGGCCAGATGGGGATTCGATTAAAAGGTCTGAATGTCACCTAGTGCAGCCTGGTTCGGATTGGC GTGATGTGTTGATAATAAGTGGTCAAGTTGAATGGCTTTTGAATCTATATGCAGCATTGAGGCAGAAATTTTCATGTGAAGGCTACTGGCTTGACTGCCC TATTGCAGTTGCTACTCGAAAGCTAATTGTCCAATTTTGTTCTGTAACAGGAACTGTATTTCTTTCTGATGATGGGAAAATGCATGAGCGGCATCTTCTG CAACTCTTATCTGGGATAGTAGAGTGGGTAGATCCTCCTGATGCAGTTTCACAAGCTATTCAATGTGGGAAAAGTGAAAGTGAGATGATTGATGGTTGCC GTGCTTTATTGGCTGTTGCAACTGTAACAACTCCCTGCGTGTTTAATGATATCCTAAAATCTATAAGGCCCTTTGGTACTCTTACCTTTTTGTCAATGTT GATGTCTGAGGTAATGAAAGTCCTCATGACTACTATCATAGACGAGGAGACTTGGAGCTGGGAAGCACGTGATGTCTTACTGGATACTTGGACTTCCCTT TTAATGCCAATAAATACTATCACGGCAGATGCTTTGCTTCCACCTGAAGGGATAAAAGCTGCAGCAAATCTCTTTGGGTTCATTGTAGAATACGAGCTAA GAATTGCTTCAGCATCAGCATTTAATGATGAGAGCGATGCAGACTATCTTCATGCTTCTGTGTCTGCCATGGATGAAAGGTTAAGCTCGTATGCTCTTAT TGCGAGAGCTTCTGCTGATGCTACAATTCCTATGCTCATGAGAGTGTTTTCTGAGCGGGTTGAACGCCTTAATCAGGGCAGGGGCATTGTTGACTTGACT GAAACTTTGGAAGAGCTTTATTCCTTGTTGCTGATTATTGGCCATGTACTTGCAGATGAAGGAGAGGGGGAACTACCACTGGTTCCCAATGCCATACAAA CCCAATTTGTTGTTAATGCTGCAGAAGCAGATATACATCCTGTTGTTTTACTTTCCAGTTCAATCATAAAATTTGCTGAGCAATGCTTAAATCCAGAAAT GAGAGCATCAATTTTTAGTCCTCGACTTATGGAGTCAATTATATGGTTCCTGGCAAGGTGGTCTCGTACATATCTAATGTCGTCAGATGGAATTGGGGAC AAAATCTTAGATTCAAGTCATCATCTCGAGCATAATTCAAAAAAGGCTTTGCTTGGTTTCTTTGGAGAGCATAACCAAGGGAAACTTGTCCTGGATATTA TTGTTCGTGTATCCTTGGTCTCACTTAAATCATATCCAGGGGAAAAGGATCTGAAGGGCGTCACTTGTCACCAGTTACTTCATTCGCTGGTTCAGCAAAA GCATATATGCGTTCACCTTGTTACTCTGAATTCATGGCATGAACTAGCAACTGCGTTTTGCACAGAACAGGCTTTATTGTTGTTGGACACTGCTCATCAG CGGTCACTTGCACAAACACTTGTTCGTTCAGCTTCAGGCATAAGAAACTCAGAAGCATCAAGCCAGTATGTAAGGAATCTCATGGGTCACATTGCAACAT ATATAGTGGAGATGTCAAGCAAGAGTAATTTTAAAAGTATTGCACAACAACCAGATATCCTCCAATTGGTCATCTGCATGTTAGAACGACTACGCGGAGC TGCAAGTGCTTCTGATCCTAGAACACAGAAGGCTATATATGAGCTAGGGTTCTCTGTAATGAACCCCACACTTGTTCTTCTTGAAGTATATAAACATGAG GTAGCATTAGCATTTGTTGTTATCTTCATATATATTTTAGTATCCTCAATGCTCTTGATACAAGTGTCATTCCTGACTCTATCTAATACTCTTGATGAGC ATTTTCATGTTATCCTTATAATAATCCCTATTTTCTAAGTGACTTCATTCCTAATAAATAAATAAAATCCAGTCCAGCAGATGTGTCTGAACTTCTAAGT TTCTGACATCTTGTTCTGTAATTATACGTAATTATTGTTTAGTCTGCAGTCATCTACGTGCTGCTTAAATTTGTACTTGATTGGGTTGATGGACAAATTA CTCACTTGGAGGCCAAAGAAACTGCTGCTGTTGTTGATTTCTGCATGCGTCTGCTTCAAATGTACTCATCACACAATATTGGCAAGATATCACTAAGTCT GTCCAGCAGCTTACTTAATGAGGAGAAAACAGATAAGTATAAAGATTTGCGTGCTCTTCTTCAGCTTCTTTCAAGCCTTTGCTCTAAAGACATGATTGAT TTCTCGTCAGATTCAATTGAGACCCAGGGCACTAACATATCTCAGGTGGTTTATTTTGGTCTTCACATAGTCACACCACTGATTTCCATTGAGCTCTTGA AATATCCCAAACTTTGTCACGATTATTTTTCTCTCCTGTCACATATGTTGGAGGTTTATCCAGAAACATTTGCACAACTCAGCAGTGAAGCCTTTGCTCA TATACTCGGAACCCTTGATTTTGGTCTCCACCATCAGGATGAAGATGTGGTTACTAAGTGTCTAAGAGCTCTGCAAGCTCTTGCTTCTTACCATTACAAG GAGACTCATAATGGTAATATAGGCTTGGGTGCACATGCCATGGGTCTTAAGGATTCAAGTGGGAATTTTCAGGAAGGCCTTTTGAGCCGGTTCCTTCGCT CATTGCTGCAGTTACTCCTTTTTGAGGATTACAGTTCTGATCTAACCAGTGTTGCAGCAGATGCTCTCCTTCCATTAATCCTTTGTGAGCAAGGCCTGTA TCAGAGATTGGGCAATGAATTGATAGAGAGACAAGCAAATCCAACACTCAAATCAAGGCTGGCAAATGCATTGCACACACTAACAAGTGCAAATCAGCTT TCTTCTTCCCTCAATCGAATAAATTACCAGAGATTTCGGAAAAATCTTAGCAGCTTCCTAGTCGAAGTTCGTGGCTTTCTGAGGACAAAGTGATCGACCA AACCATGTAGGCCATCAGTTTTGTATAGCGTCAAAAGAAGAGTTGATATCACTAATCAATACTGCAGCCATAGAAGAAAATGTTATTGAATAGATAATCT CTTGGCAGAAGAAATTTTTGGAGTTACAGAAATATCCAATGCTATCTACACTGGGTATTCTTGTTACTCAGATCTCTAGTGCTGTTTCCAAAACTAGAAG CTTCTTCTTTATTAGTCACAGGCTTTCCGAAAAGCATAAAACCTATAATCTGAAGGTATGAGATGCAGTTCAGTGAGAATGATCTTGATATCAAATTTCT CTGGTGAACTGCGTTGTTGTATTGATATGTCACTAATTCACTATCATTTTTGTTGACAAGCACAAAATCTGTTCAGATCTATTAAGAGCTGTTAAACCAT TCCCGAGTTTCTGTGTTCTTGAACTTTTTGAAAACTTTATTCTTGACCACATCAAAATGCCAAATGAGCAAGTTTTATTCACTGGTTTAGCAATTGCAGT TGTAATGAGTACATGTGACTCCATCTTACTGTGGTGTTTGTGTAAGAAACGAGATCTTGATTTGTGACGGATGGCGAGAGGTTATGAGTTCATATTCTAG AAATAATTTCTGTTTGAGGGTAAGATTGGTAAATCTACCATCTTCGGAGTCCATTAAGTGAGAAATTCTTGTATTGAAATGATGGCATGGGGCAAAATGT CTAATCCTTACATAATGTCACAAAATAGAAGTAGACACATTTGTTA BLAST |
Tissue | pods |
Gene name | LI_gene_158225; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_509243
Blastp | Exportin-4 from Xenopus with 22.78% of identity |
---|---|
Blastx | Exportin-4 from Xenopus with 22.33% of identity |
Eggnog | - |
Kegg | Link to kegg annotations (734704) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019418950.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |