Id Trinity | TRINITY_DN48108_c2_g1_i3 |
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Name Transcript | Ll_transcript_508965 |
Sequence | TTTCCCACATATTTTAGGGTGGGGATTTACTCCAAGAAGAGTAAGTTTAAAAGAGTTACTATTCATTTTAGCCATCAATTTTTTAGAAATCTAATAGTCT AGTTCTACCCATTAATTCAAACAATTGAATTTATCTAAAATTGATGGTTAGGACGAGGAGTGAGTCTAAAAAACTTACTCTTGGAGTAACTTACCCTTTT TTATACTTTTCTTATGTTCTATAAGAATTTGTAGGATATTTTCTTATATTTATTAGTGCAAGGAAGTTGCATTATGCATCCTCCACTTTGCTAAGTCTAG TGCCATTGAGAAGGAGGAGGCAAAGGAAAGCGTTGAACCTTGGCAAAATCATCATTGCAATTACAACTTTACCCTGCTGTTAGTTGAACTTACTCAAGTT ATCTTATTCAGTTTTAGTACTACATGATATCATAGGTTTTAAGAATTTTACACAATGCTACTTATCCATTTCTTTTCCATAACATATGAACCATATATTC TTTTTCACCACTTGAGTAATATACATGTGATTGAAAGTAAAGTTTTGTATATATTGGGTAAAATATGTTGCTGTGCTCATAATTTTGGTTCGTATAACAT TACATGTGTAGTCTTTAAGAATTATTTTGTTTTTCCTAGGTGATGTTACTATTTGTACTTTTGGATCACAACCTAGATTTGTGCCTCTAACGAGAGTTTA TCACTTTTTTTTGTAATTTGGAGTTGGCTGCTGAAATTCATCTTTTATTATCATGTGACTAATTTGATAGAAAGGGAGTAAGACCTGGTCATAAAAAGAA CCAGGCATATAGGATAACTTGTGGCAGTGTTTAATGAATCTTGAAGTAGTTAGTACTAAGGAATTTATGAGGAAAAGTGGGGAAGAAGTGAGTTTCATGT TAAAAGATGATCAAGAGATTGACATGACAAAACTTGTTTTCTGCGCTTTCGATTTAGGCTAGACAAATTTGAGCATCGAATGGATCTGACAATAGCAAGA CCATGATGTCCCAACAAGATGTTAAGCCTCTCCAGGGGCTGGGATCTCAATATTATGTATTGGATTCGAGTCCTACATGTTGTTCTTCAAGATATTATCA TCTTCAGATTAGTTCCCTTAACCATCTTCTTTGTGATCTTTCTGTAGACTCTACCCAGAGTTCTTGGAAGCTCAAAAGAAGAGACAATTGAAATGGATCC TGAACAGATAATTTTATGGGGATCAACTCTGTGCATCATCATAGCAGTGCACTTTTCTATGAAGCTACTCTCAGAACATGTTTTAAACTGGAAAAGGCCA AAGGAGCAAAAAGCTATAGTAATTATCATCCTTATGGCACCATTATATGCTGTGGACTCCTATGTTGGTTTGATAAACTTTTTTGGAAGTGAAGCATTCT TTACATTTTTGGATTCAATTAAAGAGTGTTATGAGGCTCTGGTGATTGCTAAGTTCTTGGGTTTAATGTACAGTTATTTGAACATTTCCTTGAGTAAGAA CATTGTGCCGGATGAGATCAAAGGAAGAGAGATTCACCATTCATTTCCAATGACTCTTTTTCAGGTGCTTCATGCTCATCAAATATGTATATGTTCTAAT TTGGTTTTGGTGACAAGTTTACTGTAAAACAAGCAAAAGATTTCATTAGAGGACAATGAATATATTTGTTTTAGTAAAAACATTATGTCCATTCATCATT TAAGGGAAACATTATGTCCATTCATCATTTAAGCTAATTACATTGATCTATGTATTATTTTTACTTCCATAATTATTTCTAGATATAAATGTGAAGTTTA ACTCATAGTGGCCACCATATGCAGCCTCACACGACCCATCTTGACCATCATACTCTTAAGCTTCTCAAGTCCTGGACATGGCAGTTTGTTGTGCTGCGCC CGGTGTGCTCCATCGTGATGATAGCCCTGCAATATTTTGAAGTATATCCGACTTGGGTGAGCTGGACACTCACAATCATCCTAAACCTTTCTGTGTCACT GGCTCTGTATTCTCTTGTTGTTTTCTACCATGTGTTTTCTAAAGAGTTGGCACCACATAAGCCTCTTGCCAAGTTTTTATGCATAAAGGGAATTGTCTTT TTCTGCTTCTGGCAGGTATTTTCCTTTGCTTTTACCTTTACCATGATTGATCCACCATAAGTTTGCATCTGTAAAATATGGATAGTCCTATTCAAAGTCA CATTTTCAGATGAAATACTGTATTTTGGTTTGGGATTTCAATCTGTCATCAGTGAGTCTTTAACTGCAGTATGCAATAATGAGTAAACTGATTGGTTCTA CATTATGTAAATTGATGCCTTGCAATTTAGTTTTATTAACCTATCTGTTCTTAGATCATCAGAGGCTTAAGATACCATATCCAAGATTGTGCACATTACA TTTGTCATATTTAAGATTGTTTTGTTTTAAGAAACATGCTGTATTAGTTTAACAACTAATGATCAATTATACAGGGAATTGTGCTCAATCTCTTGGTAAA AATTGGAATAATCCAGTCCCGATTTTCCTGGCTACCTGTGGAACGTATCGAGGAAGGCTATCAAAACATTCTTGTCTGTTTTGAAATGGTTTTCTTTTCT ATATACCAGAGTTCTGCATACAGTGTTGCACCATATAAGGTTGATAACAGAACTGGTGAAACTACAGATAAAAAGTCCAAGTGATTGTAGAACATGGACT ACTGTGTTAAAATCACCAATATATGTACTTCCAATATCAGTATGCTTTTTGTGACTTCTCCATGAGACTATTGGTATGCATGAGAACAATAGCGAAACAT GTCATCAATTAAATAAGATCTACTTACATTGGTGCTACTTCTGATGATCTAGAATGTTTTATATTCAACATTTGTTCTTAGATGTTCGACTTTCAGTGAT CTTGAGTTTCAATTCCTTTTGTTGGTTTTGCCTAAACAGCAATCCTTGATTCCTTTGGTTGCAACTGCAAGTCATTCATATTATAACCTCTATATTTATC ATGTGATATCATGTCCTCCTTAACCTTCACATTTAGAGAGTAAACATAAAATTACTGAATGATATTCATGTGGCATTCAAATAGTTGAAATGCCATAATT TAACTAGAATGGTATTATTATATCCACAGCTTCCATGTTCTGACATAGAACAAGAAGCGTGGGCTAAAAAATGCAGGCAAAGTTTGAATTTTAACATATG GGTCTTAATCCAGCTTCCTTTGTTCGGCCATGATGTGCGTGCAGCTTATTTAGAGTATTAAATCAATTGGAGATTTGAGAAGTAGCTGATAATTCGAAAT TACTAGATGAACAATATTGTCACAATTCTGGAGGTAATAAATCAA BLAST |
Tissue | pods |
Gene name | LI_gene_158262; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_508965
Blastp | Transmembrane protein 184B from Mus with 37.08% of identity |
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Blastx | Transmembrane protein 184B from Mus with 37.08% of identity |
Eggnog | transmembrane protein 184B(ENOG410XQ3V) |
Kegg | Link to kegg annotations (223693) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019449132.1) |
Pfam | Organic solute transporter Ostalpha (PF03619.15) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |