| Id Trinity | TRINITY_DN48108_c2_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_508966 |
| Sequence | TTTCCCACATATTTTAGGGTGGGGATTTACTCCAAGAAGAGTAAGTTTAAAAGAGTTACTATTCATTTTAGCCATCAATTTTTTAGAAATCTAATAGTCT AGTTCTACCCATTAATTCAAACAATTGAATTTATCTAAAATTGATGGTTAGGACGAGGAGTGAGTCTAAAAAACTTACTCTTGGAGTAACTTACCCTTTT TTATACTTTTCTTATGTTCTATAAGAATTTGTAGGATATTTTCTTATATTTATTAGTGCAAGGAAGTTGCATTATGCATCCTCCACTTTGCTAAGTCTAG TGCCATTGAGAAGGAGGAGGCAAAGGAAAGCGTTGAACCTTGGCAAAATCATCATTGCAATTACAACTTTACCCTGCTACTCTACCCAGAGTTCTTGGAA GCTCAAAAGAAGAGACAATTGAAATGGATCCTGAACAGATAATTTTATGGGGATCAACTCTGTGCATCATCATAGCAGTGCACTTTTCTATGAAGCTACT CTCAGAACATGTTTTAAACTGGAAAAGGCCAAAGGAGCAAAAAGCTATAGTAATTATCATCCTTATGGCACCATTATATGCTGTGGACTCCTATGTTGGT TTGATAAACTTTTTTGGAAGTGAAGCATTCTTTACATTTTTGGATTCAATTAAAGAGTGTTATGAGGCTCTGGTGATTGCTAAGTTCTTGGGTTTAATGT ACAGTTATTTGAACATTTCCTTGAGTAAGAACATTGTGCCGGATGAGATCAAAGGAAGAGAGATTCACCATTCATTTCCAATGACTCTTTTTCAGCCTCA CACGACCCATCTTGACCATCATACTCTTAAGCTTCTCAAGTCCTGGACATGGCAGTTTGTTGTGCTGCGCCCGGTGTGCTCCATCGTGATGATAGCCCTG CAATATTTTGAAGTATATCCGACTTGGGTGAGCTGGACACTCACAATCATCCTAAACCTTTCTGTGTCACTGGCTCTGTATTCTCTTGTTGTTTTCTACC ATGTGTTTTCTAAAGAGTTGGCACCACATAAGCCTCTTGCCAAGTTTTTATGCATAAAGGGAATTGTCTTTTTCTGCTTCTGGCAGGTATTTTCCTTTGC TTTTACCTTTACCATGATTGATCCACCATAAGTTTGCATCTGTAAAATATGGATAGTCCTATTCAAAGTCACATTTTCAGATGAAATACTGTATTTTGGT TTGGGATTTCAATCTGTCATCAGTGAGTCTTTAACTGCAGTATGCAATAATGAGTAAACTGATTGGTTCTACATTATGTAAATTGATGCCTTGCAATTTA GTTTTATTAACCTATCTGTTCTTAGATCATCAGAGGCTTAAGATACCATATCCAAGATTGTGCACATTACATTTGTCATATTTAAGATTGTTTTGTTTTA AGAAACATGCTGTATTAGTTTAACAACTAATGATCAATTATACAGGGAATTGTGCTCAATCTCTTGGTAAAAATTGGAATAATCCAGTCCCGATTTTCCT GGCTACCTGTGGAACGTATCGAGGAAGGCTATCAAAACATTCTTGTCTGTTTTGAAATGGTTTTCTTTTCTATATACCAGAGTTCTGCATACAGTGTTGC ACCATATAAGGTTGATAACAGAACTGGTGAAACTACAGATAAAAAGTCCAAGTGATTGTAGAACATGGACTACTGTGTTAAAATCACCAATATATGTACT TCCAATATCAGTATGCTTTTTGTGACTTCTCCATGAGACTATTGGTATGCATGAGAACAATAGCGAAACATGTCATCAATTAAATAAGATCTACTTACAT TGGTGCTACTTCTGATGATCTAGAATGTTTTATATTCAACATTTGTTCTTAGATGTTCGACTTTCAGTGATCTTGAGTTTCAATTCCTTTTGTTGGTTTT GCCTAAACAGCAATCCTTGATTCCTTTGGTTGCAACTGCAAGTCATTCATATTATAACCTCTATATTTATCATGTGATATCATGTCCTCCTTAACCTTCA CATTTAGAGAGTAAACATAAAATTACTGAATGATATTCATGTGGCATTCAAATAGTTGAAATGCCATAATTTAACTAGAATGGTATTATTATATCCACAG CTTCCATGTTCTGACATAGAACAAGAAGCGTGGGCTAAAAAATGCAGGCAAAGTTTGAATTTTAACATATGGGTCTTAATCCAGCTTCCTTTGTTCGGCC ATGATGTGCGTGCAGCTTATTTAGAGTATTAAATCAATTGGAGATTTGAGAAGTAGCTGATAATTCGAAATTACTAGATGAACAATATTGTCACAATTCT GGAGGTAATAAATCAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_158262; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_508966
| Blastp | Transmembrane protein 184B from Mus with 34.83% of identity |
|---|---|
| Blastx | Protein LAZ1 homolog 1 from Arabidopsis with 31.52% of identity |
| Eggnog | transmembrane protein 184B(ENOG410XQ3V) |
| Kegg | Link to kegg annotations (223693) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019449132.1) |
| Pfam | Organic solute transporter Ostalpha (PF03619.15) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |