Ll_transcript_508427

• Id Trinity: TRINITY_DN48110_c1_g1_i13
• Name Transcript: Ll_transcript_508427
• Sequence: ATGGGCACAGATGGAATATCATGCGTGAAAATGATAAATACCAACGGCGATATAGCAGGATTGTAGTTATTACTACTAACCTCTCTCTTTCACACATGCA CACTCTTCTCTATCTTCCTCACTCTCTCACTCCCTCTCTCCAAATTCTTCATCACAATTCACAACAACAACAACCTTGGTATTCTGCTAAATGATCCAAA CAACACATTCCTATGCATGTCAAAAATTCCACTACTATATATAATCTATAATATATACTATGTAATAACATTTGTTTCAGTACCAGATGGGGAAGAAAGG AAGTAGTTGGTTCTCATCTGTGAAGAAAGTTTTCAAGTCATCTTCTAAGGATTCTAATGTGTTGGAAAAGAAGGACAAAGAAGAGAAATGGCAACATGAA GCACAAGAGGTTTTGACTTTTGAGCATTTTCCTGTAGAGAGCTCACCTGATGCCACCAATGAGGGGAGTATCACATCCACACCTGTGACTGAAGATAGAA ATCATGCCATTGCCTTTGCCGAGGCAACCGCCGCAGCGGCTGAAGCCGCGGTGGTGGCTGCTCAGGCTGCTGCTAGAGTTGTGAGGATGGCAGGTTATGG ACGGCACACTAGAGAAGAAAAGGCAGCAACTGTTATTCAATCTTACTACAGAGGTTACCTTGCTCGACGCGCGCTTCGTGCTTTGAAAGGATTAGTGAGG CTGCAAGCGCTTGTGAGGGGACATAGTGTGAGGAAGCAAGCACAGATGACAATGAGATGCATGCAAGCATTAGTGCGAGTACAAGCAAGGGTAAAAGCTC GAAGACTCGAGTTAACTAAGGAGAAGCTTCAAAGGAAATTGGAGGAGCATGAACAAAGAGATCTCAAGATGGAAAAAGTGTCTCCTTATAAGCCAATGAG CCCTATGACAAAGTTGCACACAGATGGGTGGGACAACAGGCATCAAAGTAGCCAGAAAATTCAGAGAAATGATTTGAGGAGACATGATGCTGCAATGAAA AGGGAGAGAGCTCTTGCATATGCTTTCAATTCTCAGGTTTTTCATTTTTTTCTTTGAAATCACTTTTCATCACTTGTACTACTACCATAGTTTCATCATG TCCTTGTTTATGAAAGTTAAGCATGTGAGTAGAGTAGAGTACAAGCCAAAACAATAATCAATTAAGTAGAAAAGCTTAGGAATGACAACGAGACGAATTG GGACCGGTTTGTAGTTGTACTTACCCAACTTCAAACTCGAAAGTCACAACCAAACCCATGACTTAAGTAGCTTAATTGTTTGCTCAATACCATTATATAT ACACATTTTTTAATATATCCTTAAATTGTTTTATTCTAATATATATTTATATTCTGACTCCATCAATAATGAGTCAAACTATACTCTCTAGTGTTTTTTT CCCCTTTTAAGTTTTAAGAGTGAAAATATATTCTCACTATAAATAAGAGGATAGAAGTATTATTACATGTGTTTTTTTTAATATTTTGTAGTAGTATGGA GAGGAGTTCAATTCTATCAATAATGTTGGGTGATTAGGTGATCCACATACAAATAAATGTGTAGCAGAGACAACCCACATGTATGTGAATCAATTCCCTA TGGCAGACGTAAAAGCAAGGACAGTTGACCCCAAAAAAATGATTTTTCCTATTCATTGCTATATGTTAATGATTTTGTTTGCAGCAACAACATCAATATT TGAAGGTAGGCCCAAATGTTGATGATATTGGAAGCTACCAAAATGAGCATGAAGCAACTGAATGGGGTTGGGAGTGGTTACAACGTTGGACATCATCACA ACCACAACATGTGAGGCACTTGGGCCCCCCACATGAGATGACACTAACTACCTCAGCCACAACTACCACAGATGACATGTCTGAAGAAAAAACAGTTGAA ATGGACATGGTTGAACCTTCATACTCAACCCACTCCAACATGGGCCTTATGGGCCAAGACTTTCTTGATTCAAGCCCAATGTCTGATAGGCACCACCAGA GACAGTACAGTGCTGAAGTACCTAGCTACATGGCCCCAACCCAGTCTGCCAAGGCCAAGGTTCGAAATCAAGGTCCGGGTAGACAACGGGCTTCACCTGG GCCTCATTGGAACTCGTCGATGAGGAGAAATTCCCTTAATGGGTTGGGCTGTGACTCGTCTGGCTCTGGTGGGACCACTGCAGCTCGCAGCTTTCCGAAA AGCCCAAGTCCACAAATAAATGGGGTTCGTATCCAATCGAAACGCATTTCGAGTGGTAGCCCAGATAATATTGGCATTGAGGACTGGGCCTATGGAGCTC ATGGTTGGCCATGCCATGATTAATTTGTTTTATTTTCAAATTATCAATAACTATAGTAGCATGTTTTGTGTGGTCTGAACTTTGGTCTTTCACATGCATT GGTATTTATGGACAGTTTTAAATAATGTTGTTGGTTCAGTCAACAATAAGATTTGGGATTGTATAACCCAAACAAATGTATTTTCTTTTTACCAAAAAAA TAGTATCTAAGAAGCCCGTTTAAATTTTCAACTTCTGTTTCATGTGTATCTTTTTTGGCACAAGAAATATTAATGTTTGATGTTTTCTTTCCATGAAAAA AA
• Tissue: pods
• Gene name: LI_gene_158271;
• Additional information: details;

Expression of Ll_transcript_508427

FPKM

• PAB: 1.2
• PNAB: 6.6
• PS1: 3.9
• PS2: 9.1
• PS3: 4.1
• PW1: 5.1
• PW2: 15.8
• PW3: 27.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_508427

• Blastp: Protein IQ-DOMAIN 1 from Arabidopsis with 38.31% of identity
• Blastx: Protein IQ-DOMAIN 1 from Arabidopsis with 37.16% of identity
• Eggnog: NA(ENOG411040N)
• Kegg: Link to kegg annotations (AT3G09710)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019416993.1)
• Pfam: IQ calmodulin-binding motif (PF00612.26)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;