Ll_transcript_508417

• Id Trinity: TRINITY_DN48110_c1_g1_i4
• Name Transcript: Ll_transcript_508417
• Sequence: ATGGGCACAGATGGAATATCATGCGTGAAAATGATAAATACCAACGGCGATATAGCAGGATTGTAGTTATTACTACTAACCTCTCTCTTTCACACATGCA CACTCTTCTCTATCTTCCTCACTCTCTCACTCCCTCTCTCCAAATTCTTCATCACAATTCACAACAACAACAACCTTGGTATTCTGCTAAATGATCCAAA CAACACATTCCTATGCATGTCAAAAATTCCACTACTATATATAATCTATAATATATACTATGTAATAACATTTGTTTCAGTACCAGGTTTGTTGTTTAAT TAGACATATTTTTGTTACTTTGTCTGAGTTAAATTTAGAACACTTTTTTATATGTGTCTTGTTTGAGTTGTTTCTTATGTCATGTATGAATTGGTAATCA TGCATGTGATGATATATGGATGTAATATGTTTTCTACACAGATGGGGAAGAAAGGAAGTAGTTGGTTCTCATCTGTGAAGAAAGTTTTCAAGTCATCTTC TAAGGATTCTAATGTGTTGGAAAAGAAGGACAAAGAAGAGAAATGGCAACATGAAGCACAAGAGGTTTTGACTTTTGAGCATTTTCCTGTAGAGAGCTCA CCTGATGCCACCAATGAGGGGAGTATCACATCCACACCTGTGACTGAAGATAGAAATCATGCCATTGCCTTTGCCGAGGCAACCGCCGCGGCTGCTGAAG CCGCCGTCACGGCTGCTCGGGCTGCCGCTAGAGTTGTGAGAATGGCAGGTTATGGACGATACACTAAAGAAGAAAGGGCAGCAACAGTCATCCAATCTTA CTACAGAGGTTACCTTGCTCGACGTGCACTTCGTGCTTTGAAGGGATTAGTGAGATTGCAAGCATTAGTGAGGGGACATAGTGTAAGGAAGCAAGCACAA ATGACAATGAGATGCATGCAAACATTAGTGAGAGTACAGGCAAGAGTAAAAGCTAGAAGACTTGAGTTAATTAAGGAGAATCTACAAAGGACATTGAAGG AGCATAAGCAAAGAGAGCTAAAGGAACAAGTGCCTTATTATAAGGCTATGAGCCCCATGAAAAATTTATATGCAAATGGCTGGGACAACAGGCATCAAAG TAGCCATAAGATTCAGATAAATGAATTGAGAAAACATGAGGCTACAATGAAAAGAGAGAGAGCTCTTGCATATGCTTTCAATTGCCAGCAACAATGTTCG GAGATAGGCCCAAATGATAATAATGATATTGAAACCTATGCAAATGATTATGAAGCAGCTAAATGGAGTTGGGAGTGGTTGGAACAATGGACATCACAAC CACACCACGTTATACACTTGGGAGGCCCACATGAGATGACACTAACTACCACAGCCACAACAACAACAACAGAAAGCATGTCTGAAGAAAAAACAGTTGA AATGGACATGGTTGCACCTTTAGACTCAACTTACTCCAACATGGGACCCATGGGCCAAAACTTTCTTGATTCAAGCCCAATGTCTGATAGGCACCAGCAG AGAGAGTACAGTTCTGGGGTACCTGGCTATATGACCCCAACCCAGTCTGCAAAGGCCAAGGTTCGAACTCAAAGCCCGTTTAGGCAACGGGCTTCAGTTG GGCCTCATTGGAAATCACCAATAAGAAACTCTCTCAATGGGGTGGGCTACGATTCATCTAGCTATGGTGAGGCCACTGCAGGTCATCAGTTTCCTAAAAG CCCAAGCCCACAAGTAAATGGGGTTCAACTGCAGTTGAGACAGATTTTGAATGGTAGCTTGAATATTGCCATTTGAAGTTTGGGCTCTTCCCCTTAGAGC CCATGGTTGGCCATGAAGGTATTGATTTGTTTGTTTTCAAAATAAATAACTGTAGTAGCATATTTTGTGTTGTGTGAACTTTGATGGTTCACATGCAATT GTATTTATGGAGTTTTAATAATGCTGATGATTTCATGAACAATAAAAGTTGAAATTGTATGACCCAAAATTTGTATTTTTGAACAAAAATTGTATTATCT AAGGAAAAGTATTTCAATTTCTGCTTCAAATGTAAGAAAACTGTTTGTATTTGATTATAAGAAATGTTAATGTTTGAATTTTTTATTTCTATAAAA
• Tissue: pods
• Gene name: LI_gene_158271;
• Additional information: details;

Expression of Ll_transcript_508417

FPKM

• PAB: 0
• PNAB: 0
• PS1: 0
• PS2: 0.1
• PS3: 0.1
• PW1: 0
• PW2: 0.6
• PW3: 3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_508417

• Blastp: Protein IQ-DOMAIN 1 from Arabidopsis with 40.32% of identity
• Blastx: Protein IQ-DOMAIN 1 from Arabidopsis with 39.44% of identity
• Eggnog: NA(ENOG411040N)
• Kegg: Link to kegg annotations (AT3G09710)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019414614.1)
• Pfam: IQ calmodulin-binding motif (PF00612.26)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;