Id Trinity | TRINITY_DN48112_c2_g1_i1 |
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Name Transcript | Ll_transcript_507968 |
Sequence | GTTAGTCACTCCTTCCTTGCATCATCACTTCCCCCAAGTTCGAAAAGGCTCTAATTATTTTCTCTTGTATTCTTCTTTTTGGCCTTTTCTTTCTCTTTTC TCACCCAAACTATTCTCAAATATTTTAAATAATGAACACCAAGGTCCTCTCATCAGGAATCCGGTACTCAAACTTGCCGGAGAGTTATATTCGACCAGAA TCTGAACGACCTCGTCTTTCTGAAGTTTCTGTCTGTGAAAATGTTCCTGTCATCGACTTGGGTTCTAACAATCGAACCCAGATTGTGCAGCAAATTGGTG ATGCCTGCAAATGCTATGGTTTTTTCCAGGTGATTAATCATGGGGTGCCTCTAGAAATGGTGAAGAAAATGGCAGAGGTTGCATATGAGTTCTTCAACCT GCCAGTGGAAGAAAAGCTGAAATTATACTCAGATGATCCAACAAAGACAATGAGATTATCAACTAGTTTTAATGTGAACAAAGAAGCAGTGCATAATTGG AGAGATTATCTTAGGCTTCATTGTTATCCCTTGGATAAGTATGTGCCTGAATGGCCTACTAATCCTCTCGCATTCAAGTAAGTCTTTATCCATTTTATCT CAGCCTTACATAATTGAGTGGACAGGTGCTGCTGACTAGGTCTTACATTTTGACATGTTTAGTATTTTGGAAAAAGAAATATGCCTGAGGGTAGGAGTTT TGTGCCTGTCATTACATTATTTATCATTTATTTTAATTATCATTTACTCTTTATAAAAATATGCAAGTAAATGGTGAAGATGAATATGAGTGTATAAATA TTATTACACTCTTTTATGTTATATGACACATTTGTTTTTATATAATAATAAATAAATTATGGTGTAGTAGTATACATCGTGGTCTCTCTTACATCATGCA AAGAGGATGAATCAGGACCGGCGTAGAAATGTATACTTATATAGGATAAAATATGGATTTAAAATGTATATATTAATAGTGTAAATAATTTTACACTTAT TAGTAAATCATTCACGTGTTAATTATCATTGACTTAAATAAAAGTAATATAAATAAACAATAGATTAAATGGTGAAATAATGTACTTTTTTTTAC BLAST |
Tissue | pods |
Gene name | LI_gene_158278; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_507968
Blastp | Protein DOWNY MILDEW RESISTANCE 6 from Arabidopsis with 63.09% of identity |
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Blastx | Protein DOWNY MILDEW RESISTANCE 6 from Arabidopsis with 63.09% of identity |
Eggnog | 2OGFe(II) oxygenase(COG3491) |
Kegg | Link to kegg annotations (AT5G24530) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019417304.1) |
Pfam | non-haem dioxygenase in morphine synthesis N-terminal (PF14226.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |