Ll_transcript_507969

• Id Trinity: TRINITY_DN48112_c2_g1_i2
• Name Transcript: Ll_transcript_507969
• Sequence: GTTAGTCACTCCTTCCTTGCATCATCACTTCCCCCAAGTTCGAAAAGGCTCTAATTATTTTCTCTTGTATTCTTCTTTTTGGCCTTTTCTTTCTCTTTTC TCACCCAAACTATTCTCAAATATTTTAAATAATGAACACCAAGGTCCTCTCATCAGGAATCCGGTACTCAAACTTGCCGGAGAGTTATATTCGACCAGAA TCTGAACGACCTCGTCTTTCTGAAGTTTCTGTCTGTGAAAATGTTCCTGTCATCGACTTGGGTTCTAACAATCGAACCCAGATTGTGCAGCAAATTGGTG ATGCCTGCAAATGCTATGGTTTTTTCCAGGTGCTGCCCCTTGTTTTTATATTTTTCCTGGTGATTAATCATGGGGTGCCTCTAGAAATGGTGAAGAAAAT GGCAGAGGTTGCATATGAGTTCTTCAACCTGCCAGTGGAAGAAAAGCTGAAATTATACTCAGATGATCCAACAAAGACAATGAGATTATCAACTAGTTTT AATGTGAACAAAGAAGCAGTGCATAATTGGAGAGATTATCTTAGGCTTCATTGTTATCCCTTGGATAAGTATGTGCCTGAATGGCCTACTAATCCTCTCG CATTCAAGGAGGTTGTAACAAATTACTGCAAAGAAGTTAGGGAATTGGGGTTCAGAATACAAGAATACATATCAGAGAGTTTGGGCCTAGAAAAAGATTA CATGAGGAATGTTTTAGGGGAACAAGGGCAGCACATGGCAGTGAATTACTATCCACCATGCCCAGAACCAGAACTTACTTATGGATTGCCAGGGCACACT GACCCAAATGCACTTACAATTCTACTCCAAGACCTTCATGTTGCTGGACTCCAAGTCCTCAAAGATGGCAAGTGGCTAGCTATTAATCCTCACCCTGATG CCTTTGTCATTAACATTGGGGATCAATTGCAGGCTTTAAGTAATGGGCTTTACAAGAGTGTTTGGCACCGGGCTGTTGTCAATGTTGATATGCCTAGACT TTCTGTGGCTTCATTTCTTTGTCCATTTGATGATGCATTGATAAGCCCAGCAAAACCACTCACAGAAGATGGAACTGGAGCCGTATACAAGGGATATACA TATGCAGAATACTATAAGAAGTTTTGGAGTAGGGACTTGGTGGACCAAGAACACTGTTTGGAATTTTTCAAGAACAATTAATCTTTAAGGTGTGATGGCA AGAGCCAAAATATTAGAGCAGTTGAGGGATATAAAAAGAAATTTGGCAATGTATTTGACAAACCAATGTCTTGATATGCTGTCAAATTCACACCCTCTTC ACTTCTTATCTTATCCTCATTCCTATGAAGCATGTGGTATTGTCAAATCTGTATTTCTTTTACCCTTTTATTGATTGTGCCTTCGCTTAATGCAAATTGA ACTTGGTCACAGAATTATAAGTCAGACATTCATCAATTATTGTTTTCTTTTGTTCCATTTGGAGATAGTCACACCTCTCTTCAGAAGCAAGCATGAGCTT GTAGCTTTTCGGTATGAAGAGCAAAATTGTGATGTAATATCCATATGTTGAACACTTAAACTTCAAAGTTTCTTATCGTTTCTCATTCATTCTACATTCT TGTTCCATGAGAAGCAATGAGAAGTTTGTTGTGTTTTAAGTTTTAGCAAAACAATGTACCCAAAAAAGGTACCAAAACCTTAAAATAAAATGAGTTAGTT GTGCTTTAAGTCTGACATTTATTTCTCTCTCACTGATGTAGTCACGTTCCAATTCTCATTCTGATTGGTTATTGACGTGAACATCTTATTCAGCAAAACC AACTCATAAATCACAA
• Tissue: pods
• Gene name: LI_gene_158278;
• Additional information: details;

Expression of Ll_transcript_507969

FPKM

• PAB: 0
• PNAB: 0.4
• PS1: 0
• PS2: 0.3
• PS3: 0
• PW1: 1.7
• PW2: 0.6
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_507969

• Blastp: Protein DOWNY MILDEW RESISTANCE 6 from Arabidopsis with 69.6% of identity
• Blastx: Protein DOWNY MILDEW RESISTANCE 6 from Arabidopsis with 69.6% of identity
• Eggnog: 2OGFe(II) oxygenase(COG3491)
• Kegg: Link to kegg annotations (AT5G24530)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019417304.1)
• Pfam: non-haem dioxygenase in morphine synthesis N-terminal (PF14226.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;