| Id Trinity | TRINITY_DN48112_c2_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_507971 |
| Sequence | GTTAGTCACTCCTTCCTTGCATCATCACTTCCCCCAAGTTCGAAAAGGCTCTAATTATTTTCTCTTGTATTCTTCTTTTTGGCCTTTTCTTTCTCTTTTC TCACCCAAACTATTCTCAAATATTTTAAATAATGAACACCAAGGTCCTCTCATCAGGAATCCGGTACTCAAACTTGCCGGAGAGTTATATTCGACCAGAA TCTGAACGACCTCGTCTTTCTGAAGTTTCTGTCTGTGAAAATGTTCCTGTCATCGACTTGGGTTCTAACAATCGAACCCAGATTGTGCAGCAAATTGGTG ATGCCTGCAAATGCTATGGTTTTTTCCAGGTGATTAATCATGGGGTGCCTCTAGAAATGGTGAAGAAAATGGCAGAGGTTGCATATGAGTTCTTCAACCT GCCAGTGGAAGAAAAGCTGAAATTATACTCAGATGATCCAACAAAGACAATGAGATTATCAACTAGTTTTAATGTGAACAAAGAAGCAGTGCATAATTGG AGAGATTATCTTAGGCTTCATTGTTATCCCTTGGATAAGTATGTGCCTGAATGGCCTACTAATCCTCTCGCATTCAAGGAGGTTGTAACAAATTACTGCA AAGAAGTTAGGGAATTGGGGTTCAGAATACAAGAATACATATCAGAGAGTTTGGGCCTAGAAAAAGATTACATGAGGAATGTTTTAGGGGAACAAGGGCA GCACATGGCAGTGAATTACTATCCACCATGCCCAGAACCAGAACTTACTTATGGATTGCCAGGGCACACTGACCCAAATGCACTTACAATTCTACTCCAA GACCTTCATGTTGCTGGACTCCAAGTCCTCAAAGATGGCAAGTGGCTAGCTATTAATCCTCACCCTGATGCCTTTGTCATTAACATTGGGGATCAATTGC AGGTATCACAACATTTATAACATCGGGAGTCACATATGTTGTCCTAAGTTTTATACAGTACCCGGTTTCTCTTTGGTTAGAAAAGTAGAACATAGATTTA ATATATCTTAATTTTAGAAGAGTACAGACAAGGGTAACACATTTTGGAACAGAAAATATTATTCATGATCTGTTCTAAATCGCGATAATTATGTGACCCT CATTTTAATATTGGACTTGAATGATTGCAGGCTTTAAGTAATGGGCTTTACAAGAGTGTTTGGCACCGGGCTGTTGTCAATGTTGATATGCCTAGACTTT CTGTGGCTTCATTTCTTTGTCCATTTGATGATGCATTGATAAGCCCAGCAAAACCACTCACAGAAGATGGAACTGGAGCCGTATACAAGGGATATACATA TGCAGAATACTATAAGAAGTTTTGGAGTAGGGACTTGGTGGACCAAGAACACTGTTTGGAATTTTTCAAGAACAATTAATCTTTAAGGTGTGATGGCAAG AGCCAAAATATTAGAGCAGTTGAGGGATATAAAAAGAAATTTGGCAATGTATTTGACAAACCAATGTCTTGATATGCTGTCAAATTCACACCCTCTTCAC TTCTTATCTTATCCTCATTCCTATGAAGCATGTGGTATTGTCAAATCTGTATTTCTTTTACCCTTTTATTGATTGTGCCTTCGCTTAATGCAAATTGAAC TTGGTCACAGAATTATAAGTCAGACATTCATCAATTATTGTTTTCTTTTGTTCCATTTGGAGATAGTCACACCTCTCTTCAGAAGCAAGCATGAGCTTGT AGCTTTTCGGTATGAAGAGCAAAATTGTGATGTAATATCCATATGTTGAACACTTAAACTTCAAAGTTTCTTATCGTTTCTCATTCATTCTACATTCTTG TTCCATGAGAAGCAATGAGAAGTTTGTTGTGTTTTAAGTTTTAGCAAAACAATGTACCCAAAAAAGGTACCAAAACCTTAAAATAAAATGAGTTAGTTGT GCTTTAAGTCTGACATTTATTTCTCTCTCACTGATGTAGTCACGTTCCAATTCTCATTCTGATTGGTTATTGACGTGAACATCTTATTCAGCAAAACCAA CTCATAAATCACAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_158278; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_507971
| Blastp | Protein DOWNY MILDEW RESISTANCE 6 from Arabidopsis with 70.54% of identity |
|---|---|
| Blastx | Protein DOWNY MILDEW RESISTANCE 6 from Arabidopsis with 70.54% of identity |
| Eggnog | 2OGFe(II) oxygenase(COG3491) |
| Kegg | Link to kegg annotations (AT5G24530) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019417304.1) |
| Pfam | non-haem dioxygenase in morphine synthesis N-terminal (PF14226.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |