| Id Trinity | TRINITY_DN48127_c0_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_509402 |
| Sequence | TATGAGCACATAAATAAAGCCACAGTGTTATAAACTTTCCTTTTTGTAAGACTGAGTCGTCTCTTCTCACTTCTCAACCCTCTTCGATCTTTCCCTTCCT GCGATTCAATCCTCTTCGTTTCTCTCTTCCAGGTTCACCTTCTATTTATCTTTTTCTATTTTTTTGTCCAATCAATTTCGATTTTTCCATACTTCATTAT TTATCATCATGACACAAGTTTAGTTGAATTAGGGTTTGTGCGATTCTGCAAGAACATGGTTGACAACAACGATTTGATTGAAAAAGTAAGCGCCTTGGGT GAGAGGCTGAAAATTGGAGGTGCTGAGGTTGGTAGAAAAATGAGTGCTGGCATGACTTCCATGAGTTTCAAGGTCAAGGAATTCTTCAATGGTCCTAATC AGGTTGATAAGCTCGCCGAGGATGCTACCTCCGAGGCGCTTGATGACCCGGATTGGGCTCTCAATCTTGATATATGTGATTTGATTAACACTGACAAGAT CAATAGCATTGAATTGATCCGCGGGATTAAGAAGAGGATCATGATCAAAAGTCCTAGGATTCAGTATTTGGCTTTGATATTGCTTGAGACTGTTGTTAAG AATTGTGAGAAGGCATTCTCCGAGGTTGCGGCTGAGAGAGTGCTTGATGAGATGGTGAGGTTGATTGATGATCCCCAGACGGTTGTTAATAACCGGAACA AGGCTTTGATTATGATTGAAGCATGGGGTGAGTCTACCGGTGAGTTGCGATATCTTCCTGTTTATGAAGAAACTTACAAGGTACACATTCACCACCTTTT TGTGCTTGCTTGATTATCTGTCTAATCACGGGAGAAACATCTATCTAAGGTAGCCTTTGGTAGACGTGACAGAACAAAAAAGAGCAAAACATGAGTTATG GTCTATGTTTGATGTATCTTATAAACATAAAACTTACAAGGTAGCATTTAGTCGATGTTTCATAACAAGATGAAACATAATTATTATCTACGTTTTATGT TTAGTGTACTTTATAGATAATAAAAACAAATATTAACAAAATGAGAGTGAAAAGTTGGACACTTCTGTTCCACTGAAAGGGCGCCTTTGATACAAGGATG ACACTGGACAATTTAAGTGCCGTTGTCCTTCAGTCAAGTAGGGGGGAAATATGACCTTTTCTATCTCAGGAGGATTCTTTTCTACAGTATTGGAACCAAT TCAAAAATCAAACATGCATCAAAATATATCGCACTAAGGGAGGAACACAATATCTTGTTCCATCCCGTTCTTCTCATTTGCCAAATACGGCCTAAGTATT CAAGACAAAAGATGCCAATAAAATGAAGTCAACATGTTTGGACAATTTCTGCTAATAAGATGCCCAGGAACTCTGTAAAGAAAGTTCTAGGAGCCCTAGC AAGTTTAACCATTTAAATAATTGATGTGATAAATATGAACCTGTCTAAATGGAATTCATCACCTTGATAGAAATTTTGAGCATGATGTTTTTATTTTTGA ACTTTCCTTGCCTATCACTTTTTATGTTGCAGAGTCTGAAATCAAGGGGTATTCAGTTCCCTGGTCGTGACAATGAGAGCTTGGCCCCTATTTTCACTCC TCCCCATTCAGTATCTGCTCCAGAGGCTGATGTTCAAATTCATGCGCATGATGATGTTCCGGTCCTGAGTTTTACACCTGAACAAACAAAGGAAGCCTTT GATGTTGCAAGAAATAGCATTGAGCTTCTTTCTACTGTCTTATCTTCTTCACCACAACAAGATGTTTTACAGGATGATTTGACCACCACACTAGTACAGC AGTGCCGTCGGTCCCAAGCCACTGTCCTACGAATTATTGAAACCGCTGAGGATAATGAGGCACTTCTTTTTGAGGCCTTGAATGTTAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_158390; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_509402
| Blastp | TOM1-like protein 1 from Arabidopsis with 77.19% of identity |
|---|---|
| Blastx | TOM1-like protein 1 from Arabidopsis with 77.14% of identity |
| Eggnog | gamma adaptin ear containing, arf binding protein(ENOG410Y26G) |
| Kegg | Link to kegg annotations (AT5G16880) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019421988.1) |
| Pfam | VHS domain (PF00790.18) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |