| Id Trinity | TRINITY_DN48127_c0_g1_i7 |
|---|---|
| Name Transcript | Ll_transcript_509409 |
| Sequence | AGAAAATAGAGAAGGCATTTAAGTAACGTCCCAAAAAAGAAAGGTTCTATCTTTTCAAAGTTCGATCTTTACTCAGTCCTTACGCCTCGTCTCCACCAAA CTCTTCTTTTCAAGTCAGCGCATTGGGTGAGAAGCTCAAAATTGGAGGTGCTGAGGTTGGTAGAAAAATGAGTGCTGGAATGAGTTCCATGAGCTTCAAG GTCAAGGAATTTTTCAATGGACCGAACCAGGTCGATAAAGTCGTTGAGGATGCTACCTCCGAGGCCCTTGATGAGCCTGATTGGGCTCTCAACCTTCATA TTTGTGACCTGATCAATACTGAGAATGCCAATAGTATTGAATTGATCCAAGGGATCAAGAATAGGATCATGATCAAGAGCCCTAGGGTTCAGTATCTGGC TCTAGTGTTGCTTGAGACTATTGTCAAGAATTGCGAGAAGGCTTTCTCCGAGGTGGCGGCCGAAAGAGTGCTCGATGAGATGGTGAGGTTGATTGATGAT CCTCAGACTGTGGTTAATAACCGGAACAAGGCTTTGATTATGATCGAGGCATGGGGAGAGTCCACTGGTGAGTTGCGCTATCTCCCGATTTATGAAGAAA CTTATAAGGTATGTGTTCGACGCTTTTCATGCTTGTCTGCTTCATTATTTGTTTACTCTAAGGAGAAACATAAAACTAAAACTAAGGTAGTGTTTGCCTA ACATGTCATAACTCATAACAAGATGAAACATAATATATTACTTTCCTGCTATATGTTTGGCATACAATATAAATAGAGCAGAGATTAATGGCATGATTGA AAAAGTAGAACTTTTTGGTTCCACTGAAAGGGGTGTCTTTGATACTAGGTACAACACTGTACAATTTTAGTGCCTCTGTCCTATGGTTGAGTAGGGGGGA TATGAGTTTTATCTGTCCCAGGAGGAGGCTTTCATACAGTATTTAGACCAATTTTAAAATCAAACAAGGGCCAAATACTTTTGTGTTAGGTTGCCCCCGT TTTCTTTTTGAACATAAACTGCACCCTAATGGGTTGAACCAAAGATAACAGAACAAAACATCTTGTTCCATCCTGTTCTGTTCGCCCGATAAACCTGCCT AAGTATTGGAGACAAAGATACCAATAAAATAAAGGTATCATGATTGGACTATTTCTGCTAATAGTATGCCCAGAAACTCTGTAAAGAAAGTTCCAGGAGT CATAGTAAGTTGAATTATTTAGCTAATTCCTGTTTGATAATATGAATTTGTCTAAATGTAATTCATCACCTTGATAGCAATCAGGAGCACGGTATTTTTT TTTTAAGTTTCCCTGCCTATCACTTTTTATGTTGCAGAGTCTGAAATCAAGGGGTATTCAGTTCCCTGGTCGTGACAATGAGAGCTTGGCCCCTATTTTC ACTCCTCCCCATTCAGTATCTGCTCCAGAGGCTGATGTTCAAATTCATGCGCATGATGATGTTCCGGTCCTGAGTTTTACACCTGAACAAACAAAGGAAG CCTTTGATGTTGCAAGAAATAGCATTGAGCTTCTTTCTACTGTCTTATCTTCTTCACCACAACAAGATGTTTTACAGGATGATTTGACCACCACACTAGT ACAGCAGTGCCGTCGGTCCCAAGCCACTGTCCTACGAATTATTGAAACCGCTGAGGATAATGAGGCACTTCTTTTTGAGGCCTTGAATGTTAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_158390; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_509409
| Blastp | TOM1-like protein 1 from Arabidopsis with 75.78% of identity |
|---|---|
| Blastx | TOM1-like protein 1 from Arabidopsis with 77.71% of identity |
| Eggnog | gamma adaptin ear containing, arf binding protein(ENOG410Y26G) |
| Kegg | Link to kegg annotations (AT5G16880) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019424359.1) |
| Pfam | GAT domain (PF03127.13) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |