Ll_transcript_509403

• Id Trinity: TRINITY_DN48127_c0_g4_i2
• Name Transcript: Ll_transcript_509403
• Sequence: GTTTCACGTAAAAAATTATTTAGCAAAGATTAGAAGGTTAGTTGAGAAAACGATGCAGAATGACTTTGATCGTTTTACCAGTCACAATGATAGGTTGATT AATATTCTAATCAACGTAGGATCAGGTTTCCCAGAGCGTGTGCCAAACCATGTAACAAACGAATCAGAATATAAATAATGTTTAATTTTTATGACTAATG TGACATGTTGTTATTAGTTTGGTATAGGTTTTGTGACAGAATTTAGGACAACAAAATCTTTGTTCCTCTTACTAACAAGTCTATGCAAAGCAGAAAGGAA GAAGAGAGTTTACTGAGTCCTTACGCATCGTCTCTTTTCACTCCTGAACCCTTTTCCTTTTTTTCTTCTCTCTTTTTCTTTTATTATTTATCACAAAAAC ACATTGGTATATAGATACACAAGTGGCGTTGAATTTGAAATTAAACTAAATTAGGGTTTCTGCGATTTTCTAACAAGATGGTTGACAACAACAATTTGAT GGAAAAAGTGAGCGCCTTGGGTGAGAGGCTCAAAATTGGAGGTGCTGAGGTTGGTAAAAAGATGAGTGCTGGCATGAGTTCCATGAGTTTCAAGTTCAAG GAACTCTTCAATGGTCCCAATCAGGTTGATAAAATCGCCGAGGATGCTACATCTGAGGCTCTTGATGACCCTGATTGGGCTCTGAATCTTCATATCTGTG ACCTGATCAATACTGAGAAGGTCAATAGCATTGAATTGATACGCGGAATTAAGAAAAGGATCGTAATCAAGAGTCCGAGGGTTCAGTACTTGGCTCTGGT GTTGCTTGAGACTATTGTTAAGAATTGTGACAAGGCTTTCTCTGAGTTGGCTGCTGAGAGGGTGCTTGATGAGATGGTGAGATTGATTGATGATCCTCAG ACTGTTGTTAATAACCGTAACAAGGCGTTGATTATGATCGAGGCGTGGGGTGAGTCCACTGGCGAGCTGCGATATCTCCCTGTTTACGAAGAAACTTACA AGAGTCTGAAATCAAGGGGTATTCGGTTCCCTGGTCGTGACAATGAAAGCTTGGCTCCTATTTTCACTCCTCCTCGTTCAGTGTCTGCTTCAGAAGCCGA TGTCCATCCTCCGCAGCAGATTCGTGTGCGTGATGTTCCTCTCCCGAGTTTTACGCCTGAACAAACAGAGGAAGCATTTGATGTTGCAAGAAATAGCATT GAGCTCCTCTCTACTGTCTTATCTTCTTCACCTCAGCAAGATGTTTTACAGGATGATCTGACCACCACACTTGTGCAGCAGTGCCGTCGGTCCCAAGCTA CTGTTCTGCGAATTATTGAAACTGCTGGGGATAATGAAGCACTGCTTTTTGAGGCCTTGAATGTTAACGATGAGATTCAGAAGGTTCTCTCCAAGTATGA AGATTTGAAGGCGCCAACACTTGTTCCAGTTCCACCTGAACCAGCTACGATACCTGTTGCTGTTGAGCCAGATGAGTCACCCCGTCATACTAAAGAAGAT GCCTTGATTAGAAAGCCAGTGGGATCAAGAGCTAGTGCCCATGGAGGGAGCAATGATGATATGATGGATGACCTGGATGAGATGATTTTTGGGAAAAAAG GTGGGGACTCTTCAGCAGATGGAGGACATGATCCGAAGAAGCCGCAATCATCAAAAGACGATCTTATCTCTTTCTAAGCTGCACTCCAAATCAACTGAGG ACAGGACCGTCTCTTCGACGTCTCGATACTTTTTTATATCTCAACGTTGGTTATGAATTTCAGACTGCTCGTTCCATTATATATATTTATTTATTGCACA TTGTGTGCAACTAATGTTTGACTTTATGGTATATAAGTTGTTGACACGGTTGACTTTTTCTTAGAATTTCAATGGGGTTAGTTCATACTTCATATTGTCT TTGATTTTTTGCAATTCTCTTATGTTTGAAAGTGCCAAAACTAGCAAAGGGGGAAAAGAGAAAGAGAAATAAAATAAGCATTGGAAGATACACAAGGTGG GTGTGTGGTTGGTTTCTCAGTCCAGCAAGTAGCTTGGATTGAATTCTAGAGTTCCCTTGCAAAATATTAAACCACATTATGTGTCTGTTAGATATATAAA AACACAGTGAACATTAATTGTTGACAAGTGTAGTGAAATTCTCTTATAAATCCC
• Tissue: pods
• Gene name: LI_gene_158393;
• Additional information: details;

Expression of Ll_transcript_509403

FPKM

• PAB: 98.2
• PNAB: 10.9
• PS1: 13.2
• PS2: 8.4
• PS3: 13.4
• PW1: 14
• PW2: 14.9
• PW3: 16.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_509403

• Blastp: TOM1-like protein 1 from Arabidopsis with 72.17% of identity
• Blastx: TOM1-like protein 1 from Arabidopsis with 71.67% of identity
• Eggnog: gamma adaptin ear containing, arf binding protein(ENOG410Y26G)
• Kegg: Link to kegg annotations (AT5G16880)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019444590.1)
• Pfam: VHS domain (PF00790.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;