| Id Trinity | TRINITY_DN48129_c2_g3_i4 |
|---|---|
| Name Transcript | Ll_transcript_510388 |
| Sequence | TAGAGATATAGAAAGGAGTGTTGGTGTGGCTCCAAATTAACCACGAAACTATAACATAATAACAACAATTTATATTCACTCAATTCATCATCTTCTTCTT CTTCTTCTTCATTCTGCAACACAGTGCATATACCAAAGTGAGGTAAATGATAATGGATATGACTAAATCCACACCTTTGACGTGGTCCCACACCATCTCT CATTCTCTTCATCTTCCTGCTCCCCTCTTTACCACTCAGGCTAGGAGCTTCAGGGTTTTGTGTGCCTCTCATCAAACCCCGAAGGGGAATCAAATGATCA TATCCATAACTGGAGCAACAGGTTTTATAGGAAGAAGGTTGGTGCAAAGGCTTCATGCAGACAATCATAGTGTTCATGTCTTGACCCGTTCTAAATCTAA AGCACAAGAAATCTTTCCGGTGAAAGACTTTCCAGGAATCAAGATTGCAGGGGAGCCAGAATGGAAAGATAGCATTCAGGGCTCAACCGGGGTTGTGAAT TTGGCTGGATTGCCCATAAGTACCAGATGGTCTTCTGAGATAAAGAAGGAAATCAAGGAGAGCAGGATTAGAGTGACCTCAAAGGTAAGCATACATCTCC AACGGATAAAATAATAAAAATATCTTTCTTTTTTCATTTGGCAAAATATATCTTTGCGTCAACTTAAGCAAGAGTTATTTACATGAACCATTTCTTATTC TTCCTCTGACCTATTCATTTCATAGCAAAGGTTGTAGAATTGATAAACAGTTCACCAGATGATACTCAACCTAAAGTTTTTGTTAGTGCAACAGCAGTTG GTTATTATGGTATGCTTTTAAGCCTAGAATGGTTCTTTATTGGTTGATCATCTTCTTGCTTGTTAATTAATGTTGTCATCGATTATTTTCTCCCTTCTTG TGTAATAATACTTATTGTCATTGATTATTACATTCTTCTGCTAGCAAATGTAGTTATTTTTGTAGCATGTATGATTTTGCATCAAAAGTTTGCTTAACAT TTTCATTTGATTTTGCTGTGTTCAGGCAGCAGTGAGACACAAGTTTTTGATGAACAAAGTCCATCGGGAAAGGATTACTTGGCCGAGGTTTGTAGAGAAT GGGAATCAACAGCCCTACGAGTAAATGGTGATGCTAGAGTAGCTCTTATTCGTATTGGTGTTGTTCTTGGTAAAGATGGTGGAGCACTAGGTATGAACTA CTTAACTACATGCTTCTGGCTGCAAATTTACTATCTAACATGAAATACTATCTAATCTAGTTAGGGTTTTTATTAATGCATTATTCTTGAAAATCATTAT ATTGTTTGGTTTGACTGATAATTAATTCCTTGAGCCTCTGCAGCTAAAATGGTACCCCTCTTCATGATGTTTGCTGGTGGTCCTTTAGGCTCTGGAAAAC AGTGGTATTTAAACTCAGTCACTTGGCTTGTTATAGTTTGCTTTTTAGTACTGTTAATCTATTATTACCGGCACTCGATTAGTGAAGCAATTTCTCCCCT CTGCCTTGCTTTTTTCTTTCTAAATTGCAAACAAGTGAACAACTCTGTTTGCTGCTAGGATAACCTGCTATGTTAATTTCTAGGTAGTTGTCAACTTGTC ATGATTGCGGGC BLAST |
| Tissue | pods |
| Gene name | LI_gene_158407; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_510388
| Blastp | Epimerase family protein SDR39U1 homolog, chloroplastic from Arabidopsis with 75.65% of identity |
|---|---|
| Blastx | Epimerase family protein SDR39U1 homolog, chloroplastic from Arabidopsis with 75.65% of identity |
| Eggnog | Epimerase(COG1090) |
| Kegg | Link to kegg annotations (AT2G21280) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019450999.1) |
| Pfam | NAD dependent epimerase/dehydratase family (PF01370.20) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |