Ll_transcript_509561

• Id Trinity: TRINITY_DN48133_c1_g1_i2
• Name Transcript: Ll_transcript_509561
• Sequence: ACAGGGGCAAATGCTGAACAAAAAAACAAGTATAAATATTTAGGGTTTCGCAAATCGCAGCTTATCTTCTCTCTCACAGTGTTTTTAGGGTTTGGAGAAG AAGAAAAAAAAAGCGTTTGCTTCAATGGTTGGATCCTTCGACGTCGCCGCCGTTCCTTTCAACCCCGACGGTTGGGGCCCACCTGACGCCGCCGTCGCCA GTTCCAACACCACCAACCTTCCCGACAATGTCCCATTCGCTCCCTTCTCCCGCTCCGACAAGCTAGGCCGAATCGCTGATTGGACCCGAAACTTCAACAA CCAGACCCGCTCCAAGAACCCATCCGACGCCGTTTTCGACTTCACCAACGACGACTCCTTCCCCGCCTCCGCCGAAGACGACGCCTCCTTCCGCCTCGTC GACGGTAAACCACCACCGCGCCCCAAATTCGGCCCTAAATGGCGGTTCCAGCAACAAAGGCAACTCCCACAGCGCAAGGACGAAGAAGTTGAAGCCAAGA AGCGTGAAGCAGAGAAAGAAAGAGCTCGCCGCGATCGTCTCTACCATATGAACCGCTCGAACCCTAACGGACCTCGCCGAGAAGCCGCCGTGTTCAAATC CTCAGTTGATATCCAACCTGAATGGAACATGCGTGATCAGATCCCTTTCTCGACATTCTCCAAGCTCTCATTCACCGTTTCCGAGCCAGAAGACCTTCAA TTCTGCGGTGGCCTCGAGTATTATGATCGAGCCTATGATCGTGTTACGCCTAAGAGCGATCGCAGATTGGAGCGTTTCAAGAACAGGAACTTCTTCAAGG TTACAACTACTGATGATCCTGTTATTCGAAAACTCGCAAATGAGGATAAGGCGACTGTTTTCGCTACGGATTCTATCCTCTCCACACTGATGTGTGCACC TAGGTCTGTTTACTCTTGGGATATTGTTGTTCAGCGTGTTGGGAATAAATTGTTCTTTGATAAGCGTGATGGTTCGCAATTGGACTTGCTTTCGGTTCAT GAGACATCTCAGGAGCCTTTGCCTGAGGCGAAGGAGGATATTAACTCGGCACATTCGCTGAGTGTTGAGGCTGCGTATATTAACCAGAATTTCTCGCAGC AGGTTTTGGTTAGGGGTGGGAATAAGGTGAATTTTGATGAGCCTAACCCCTTTGCTAGTGAGGGTGAAGAGGTTGCTTCTGTGGCTTATAGGTATAGGAG GTGGAAGTTGGATAATGAGATTTATCTTGTTGCCCGGTGTGAGGTGCAAAGTGTGCTTGATGTGAATAACCAGAGGTCTTACCTTACTTTAAATGCTTTG AATGAGTTTGACCCGAAGTATTCGGGCGTGGATTGGAGGCAGAAGTTGGAGACTCAGAGGGGTGCTGTGTTAGCTACTGAGCTGAAGAACAATGCGAATA AGTTGGCTAAATGGACTGCTCAGGCTCTGTTGGCGAGTGCTGATTTTATGAAGTTGGGATATGTTTCTCGAATTCATCCACGTGACCATTTTAATCATGT GGTTTTGTCTGTGGTTGGATATAAGCCAAAGGACTTCGCGGCACAGATTAATTTGAACCCAAATAACATGTGGGGAATCGTGAAGTCAATTGTGGACTTG TGCATGAAACTGGAAGAAGGGAAATATGTTCTTGTGAAGGATCCGTCTAAACCACAGGTTAGGATTTATCAGGTTCCTGCAGATGCATTTGAGAATGACT ATGTGGAGGAGCCACTTCCGGAAGAGGAACAAGCTCAACCTCCAGCAGAGGGTGCTGATGGTGAAGAGGCAGCTACTATCTCAAATGATGTGACTGATAA GCAGATAGATAACAAAGCTTGAGAGGTCACATTTATATAGGGTCTTAATGTTAATGGCTGTTCAACTGCGAGCTGCACTCAGAATTATTTTCTCCCCTCG TGTGCTCACTTATCCTGCTGAAGTTTTGCAATTCATGTTCCTTTGAACCAAAACGTTTGAAGTCCAAACTTAGAGTTTTTTTATATTACCGATGTTTATG ATTTATATTGACCTGAACATATTTAAGTGGAATCAGAACGTTCATTAGAATGTACCATGCTTTTTTTTTGCAAGTTGATCATATTGTTATAATAAGTGCT GAAAAATACTAATTTCTTCAAGATTCAAACTCACTCC
• Tissue: pods
• Gene name: LI_gene_158436;
• Additional information: details;

Expression of Ll_transcript_509561

FPKM

• PAB: 14.4
• PNAB: 57.1
• PS1: 46.8
• PS2: 49.5
• PS3: 50.3
• PW1: 42.8
• PW2: 32.6
• PW3: 31.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_509561

• Blastp: Eukaryotic translation initiation factor 3 subunit D from Arabidopsis with 75.69% of identity
• Blastx: Eukaryotic translation initiation factor 3 subunit D from Arabidopsis with 76.97% of identity
• Eggnog: Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome (By similarity)(ENOG410XP1E)
• Kegg: Link to kegg annotations (AT4G20980)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019425261.1)
• Pfam: Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) (PF05091.11)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;