Ll_transcript_509290

• Id Trinity: TRINITY_DN48136_c0_g4_i1
• Name Transcript: Ll_transcript_509290
• Sequence: AAATAATTTACATTTGCAAGCTTGACCACATTGCATCCACCTAATTTTTCCTAAAGATATGATAAACTAAAGGATTTAATAATTGTTATTATTATAACGT GAACACTACTATCTCTTTCTTTCTATCTTTCTTCTTCTTCTTCCTCATCCTTATTTCAACTCTCTCATTCTCTCAAACCCTTCGACTTTCATTTTTGAAC CCAATGCATACTCCTAACTCATTAATCCCACTTTTCCAAACCCATGACCCGGATCCGAATCCATCTATTCGGGTCCCACTTCATAACCTCTCTATCCTCA AAACCCGATTGGATTCTCTACATCACTTCCTATCTAACTCCATCAACACCCGCACCCTTCTAACCAATCACCAATTGACATCTGTCTCAAACGACGTCGT TTCTTCTATCCATCAATTAATAGTAAACGGTGCCGCTCTCATTTCCTTCGATGCTAAGTTACCGGATCAGCCGGTAGCGCCGGTTACTAAATTGGTGTTA GATAAGGGTAAGAATTTGAAAACCGAGGTTCGTGAAGAAAACGATGTCGAAGATTGCGACGGCGGCGGCGGCGACGGCGGTGGTTGCGAGATTGTGGAGT TTGATGCTGTGGAATTGCTGGCGGAACATACTCATTTCTGCGAGATTTGTGGTAAGGGTTTCAGGCGAGATGCGAATTTGAGGATGCATATGAGAGCTCA CGGGAATAAGTTTAAGACGCCGGAGGCGTTGGCGAAGCCGTTACCGGCGGAGGATGGAGGTTCGGTGTCGTCCACGCGCCGCCGTGGTGTGGCGACTCAG TTCTCGTGTCCTTTTGAAGGTTGCAATAGGAACAAGGGGCATAAGAAGTTCAAGGCGTTGAAATCGATCGTTTGCGTGAAGAATCATTTCAAACGGATCC ATTGCCCGAAGATGTATTCGTGTAACCGTTGTCATAAGAAGAATTTCTCGGTGCTTTCGGATTTGAAGAGTCATATGAAGCAATGTGGTGAATGTTCTAA GTGGAAATGTTCGTGTGGGACCACTTTTTCGAGGAAGGATAAGTTGTTCGGACACATTGCCCTATTTGAGGGTCACATGCCTGCTCTTGCTGTGGATGAT GTGGAGAAAGGGAAAAAGTCGGCGATTGCGGTCGCGGTTGAGGAAGGTGAAGATCCAATGTTGATAAATGATTTTGAATTCGCTGAATTTGGTAATTGTT TTGTTGATGATTTTGATGATAATAAGTTCTTTGATGATTTGGATAAATTGGATACTTTTACCTCTTTGGATTTACCATCCATTTAACAAGAGGTTGAGAT CACCTGTTCTCAAGGCTGTCGTATTCCATGTCCGTAGTGAGTAACTGATTGGTCCGGGACATAAAATGAGACAGTCTTTGGGATAGTTGATCTCTGTCTG TGTATGATATGTGGAAAACACTTTTGTTTGAAGGGATTTTACGAATTTCGGTCATCAGTGATCTCTTTGCATCGAAAGGATCGATATGTGGCTGCTATGG GCTACGCACACCTTAGTACTCACAAAGAAAATTGCAGTTGCAGGTAAAATTGTTGTGGCACTTTCTTATGAGAAATGCAGCTAATGTGATCATGATTGTA GTGAGTAAGTGTAATATTGTGGTTGTAATTGCTATGTACATTGCAATTTTAAACTAGAGTGGTTTTTGTTTCACTAGCACATTAGATCATTGATATTGTA TTTATAGATATTTGTTTATTTATTTTGGTTCCATGTTTTTTGTGTAGAGAATAACTTCATTATCACTATCAAAATAATACATGAATTATGATTAATAAGC AAGATTAGTGCCACCAATTATGAAGGGTTCTCAACCCTTACTTAATTCATAAACAACAAAAGCATTTATTGATTGTAGTTGTTTCATGTTATTAAGATTT ATTATCAAGCTAGTGATGGGAAATGAAGGTTAGTATTTGGTAGTTAGTGTGTTTAATGTTAAGAAACAGTTGCTAGGCTCCGCATATGTTCATCTTATAG GCCAAGTGTGAATAAGCCGATAGAGATGACAAAAATATTCATCCTAACTTATGGGTGGGTACGAGTATCATGATACCCGTTCTGCCCCGTTGCCATCATT ATAAGCTGAGCAACAAAAGGCTCAACTATCACAACCCAAACCTAAATCAAGAGCTTGAAGATGGAGATTAAGATGTGAAGTCTGAACTGGTGAGCTGCAA AATCTGCTACTAGCTGATGCATGTGGCCACCGAATCGGTCAGGTCGATGAACAAATAACCGGCCTGCCGCCTTGTAAAACAACCTGAAATAGATGAGATT TCATAGATAAGTAAGATATTTGGTACTAGGGAGCAAACATGAATGGTTTTGAACCTTAAATGGTGTTACTTTGTGGTGATATGAGACTTTTGATCAAAGG GCAAGATGTGGAAAAAATCTGAAATAAGTTATTTTTAAGGGTGAGTTTGCGTATTTGTAATTTTAAATTGTTTCTATTGCTACCTGAAGGTTATGAGTTC AAATATGTGGTTCTCACGGGATATTGATCCTACGAGTACTCGCAGATATTTTTGTGAGTATCCACGAGTGGAATTTGTCAACTCGTCTATTCTTGTCCCG TGTGGAATTTGGAAAAGAGGGCGTGGAAGTTGGAAAAGAGGGGCAGAATATTGAATTAAGTGAGGGAGAG
• Tissue: pods
• Gene name: LI_gene_158461;
• Additional information: details;

Expression of Ll_transcript_509290

FPKM

• PAB: 12.6
• PNAB: 5.5
• PS1: 9.5
• PS2: 2.4
• PS3: 3.4
• PW1: 7.7
• PW2: 6.1
• PW3: 4.5

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_509290

• Blastp: Protein SENSITIVE TO PROTON RHIZOTOXICITY 1 from Arabidopsis with 54.81% of identity
• Blastx: Protein SENSITIVE TO PROTON RHIZOTOXICITY 1 from Arabidopsis with 53.85% of identity
• Eggnog: Zinc finger protein(COG5048)
• Kegg: Link to kegg annotations (AT1G34370)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019437639.1)
• Pfam: C2H2-type zinc finger (PF13912.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;