| Id Trinity | TRINITY_DN48136_c0_g4_i2 |
|---|---|
| Name Transcript | Ll_transcript_509297 |
| Sequence | GAAAAACATGTTGAGGAGAGTGAAATAGTGATTATCCACCCCTTCTTCTTCATCCATTATTTCAACTCTCTCTTCTTTCTTAAACCAACCTTAACAAAAT GCCTAATCCCCAAACCCACGACCCGGATCCGAATAAATACAACCGGGTTCCACTTCATAACCTCTCACTAATCCGAACCGGATTAGATTCAATCCATCAC CGTTTATCCCAATCCATCAATACAAACACTCCTCTTACTAATCACCAATTCACCGCTCTCTCTAACGACGTCGTTTCCTCAATCCACCATTTAATTCTCA ACGCCACCGCAATCGTCTCCTCCGCCGCAAACTTCACTCTTCCACCGCAACCGGCGGTTATTAAACCTTCGTTGGAATTGAAAACGGAGGTTCGCGAAGA TTGCGAAATCGTGGAGCTCGACGCTATAGAATTGCTCGCAGAACACACTCACTTTTGCGATATTTGTGGAAAGGGTTTCAGGCGCGATGTGAATCTGCGG ATGCACATGCGAGCGCACGGGAATCGGTTCAAGACGTTGGAAGCGTTGTCGAAACCGTTAACGACGGTGGATAATGGCGTGGTTTCATCCACGCGCCGTC GCGGTGGTGTGTCGACTCGGTTCTCGTGTCCGTTCGAAGGTTGTAACAGGAACAAGGGGCATAAGAAGTTCAAGGCGTTGAAATCGATCGTTTGCGTGAA GAATCATTTCAAACGGAGCCATTGCCCTAAGATTTACTCGTGTAACCGTTGTCACAAGAAGAATTTCTCGGTGCTTTCGGATTTGAGGAGCCACATGAAG CAGTGTGGGGAATTTTCCAAGTGGAAGTGTTCTTGTGGAACCACATTTTCAAGGAAGGACAAGTTGTTCGGACACATTGCCCTCTTTGAGGGTCACATGC CTGCTCTTGCTGTGGATGAAGATGAGAAAGGGAAGAAGGTGATCGTTGCGGCCGCGGAGGTTGTGAAGGACTCGGACGAGGAAGAGGAAGATCCGATATC GATAAATGACAATGAATCGGGTGCTTGTTTATTTGATGATGACAATTGGTTCTTTGATGACTTGGATAAATTTGATGGTTTCACCCCTTTGGATTTCCCA TCCATCTAACATGAGGAGTTAGTGATTGCTTGACTCGGATTTTGTATGATACGGAAAAGACTTTGTCGAAGCGATTTTACCCGTTTCGAATGATGGATCG ATCTGTGACTGCAATCGTTTAGGGACACCTTGGTATGCATGAAGGAGATTGCATTTGCAGGTAAAATTGTTTTTTGCTAATGTTTTCATGATTATAGTTA AGTTGCATAAATTTAGTATTGTGTTTGTAATTGCTATGTTGATTGCAGTTTTGAACTTGAGTGGTTATTGTTTCACTAATCACTAGCACATTTGACATAG ATGCATTGTTAGGTTATTGTTTCACTAATCACTAGCACATTTGACATAGATGCATTGTTAGGTTATTGT BLAST |
| Tissue | pods |
| Gene name | LI_gene_158461; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_509297
| Blastp | Zinc finger protein STOP1 homolog from Oryza sativa with 50.43% of identity |
|---|---|
| Blastx | Protein SENSITIVE TO PROTON RHIZOTOXICITY 1 from Arabidopsis with 59.88% of identity |
| Eggnog | Zinc finger protein(COG5048) |
| Kegg | Link to kegg annotations (4324940) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019437639.1) |
| Pfam | C2H2-type zinc finger (PF13912.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |