| Id Trinity | TRINITY_DN48143_c2_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_510021 |
| Sequence | GGCACACCTTTTGGTATATAGTATTGTTGATAAACACGCCTAGTCAGCATCCAATATCACCCATTTTGATTTGTCGGTGATTCATTACCCAATTCCCATT CCCATTCCGAATCCCAAACCTAATTCCTCTCTCAAAAAAACACTTCTCCTTCTCCCATTCCACCACCACCCGATTAATATCCACCGTCTCCGATCCAAAT GGCCGCCTCATCACGGCGGCTCCGGGACCTTCAATCTCAATCCGGCAACAAGATCTGTGTTGACTGTTCCCAAAAGAACCCTCAATGGGCCTCAGTCTCC TACGGCATCTTCATGTGTCTAGAATGTTCCGGAAAACACCGTGGCCTCGGCGTTCATATATCCTTCGTCCGATCCGTTACTATGGATTCATGGTCTGATA TTCAGATCAAGAAAATGGAAGCCGGTGGCGGAAACGATAATCTCAATGCGTTTCTCGCCAATTACGGTATTCCTAAAGAAACTGATATTGTTACCAAATA CAATACTAACGCCGCCTCGGTTTATCGCGACAAGGTTCAGGCCATCGCTGATGGCCGTCCTTGGCGCGATCCCCCGGTGGTGAAGGAGAATCTTCATAAC GGTAAGGGGAAACCGCCGTTGGGAGGAGCCAGGGTTTCTGGTGGTGGAGGAGGTTCTGGTTGGGATAGTTGGGATGATGATGGTTATGGATCGAGAAATA ATGATATTAGGAGAAATCAGAGTAGTGGTGATGTTAGAGGAGGGATTGGTGGTGGTGGAGCACCGGCTCGTTCGAAATCGTCGCAGGATATTTATACTCG GTCGCAATTGGAGGCTTCTGCTGCTAATAAGGAGAGTTTCTTTGCGCAGAAGATGGCGCAGAATGAGTCGCGGCCGGAGGGTCTTCCACCGTCTCAGGGT GGGAAGTATGTTGGGTTTGGATCGAGTCCTGCACCTTCGCAGAGGAATATTAATCAGCAGAATGATTATTATTCTGTTGTTTCTCAGGGGATTGGTAAAT TATCATTGGTTGCTCAATCTGCTGCTAGTGTTGTTCAGGCAAGCACAAAAGAGATCACTGCTAAGGTAAAGGAAGGTGGTTATGATCACAAAGTGAATGA AACTGTCACTGTTGTTACGCAGAAGACATCAGAGATCGGACAAAGGACATGGGGTATAATGAAAGGAGTAATGGCTATGGCTTCACAGAAGGTTGGAGAG TTCACTAAAGACAACCCAAGTTGGAAGTCTGATAACTGGCAACAAAATGAAAATAACAGAAATGGTTTGTATCAGGAGTACAATCAAGAAAATAGCGGCT GGAATTCTTCTTCCAGAGGAGGACAACCTTCATCTGTTGGACAAACTAATACTTATCACTCAAACTCTTCAGATGATTGGGGCCTTAAAGATTCTAGGAA GGAAGAACTAGCGAAAGGGTCAAGTCCTCAGTCATCTAATACTCGCAATTCTAGCTCTTGGGATGATTGGGACCACGAATATCCTGTGAAAAAAGAACCA GCTAAAGGACCAGCTTCCCATACTAGTGATGCTTGGGCTGGCTGGGATGATGGATTTGATAGTCGGAATGCATCTAATAATAAAACTGTTGGTCATAATG GGAAGTCAGATTCCGCTTGGACTGGAGGAGGATTTCATTAAGGTTTGTAAGTTGTGCAATTCTCTACGTAGACTTTGGGATCAAAACTGGACGTATATAA AGGAAATGGAACTAAAGAAATTTTTCACACGATATTTGAATGGTTTACATTTGGAATTATTTTTAGCCCAGTACTGTTGTCTATGTGACTGAGTTATTGT CGAACTCATAATCTGCTTTGTAGGCCATTAGATAACAATTATGCCACACTTAAACCTTTTCTAAATGTCTCAGATTATGCACAATCTTCTCTCACATGCC ATGCATTGATGAATTTTCATTTTAAGCTGCATAACTACAAAACTTATTGAACTTCTAATTTGTGCTTTTTTTTTTGTGGGGATGGATGGGAAGGAGGATG AAATGCCGGAAAGGAGTTAGCACCTTGAGATTGAGAACCACCATTTTGGGTTTTATCATGTTGACCCTATATTGTTGTTATCAGTTTCAAAATTTTGTCA TGTGACAAAAATATGGTAACTTTCTGACCGAACATGATCGATGTGACAGGATTGTCAAATATAAGTTTCTTGGTCACTGTTAAAAACCAGACCTCACAAG TGCAGGGAGAATGATTTTATTGAGGTTAGTATATTGTCAGCAAGACCCTTCTGTAACTTATGTTCTTTTTAATATTTTGGGAACTTCTGTATTTTTAAGG AAATGTACTTTTACAATTACATGTACAAGTATCCAAAGAAAGGGCTAATTGCCCAAATTTAAGAGAACTATCACCTGGAAGTGTGGTGAAACATTATCAT GACATCAAAATTTCATTATTGTTTTAAATTTGTAGCATGTGGTTTTTGCATCGTTATTTTCTCATAATTTATCATTATTATGTGTCAAAAAAAAATACAA TTGTGGAGATCAAGCTTCAATCTTTTGCCATCTTATGGAGTATCGTTATTATAAAGTTTTTCTGGTGAACAATTTTATTGATTTTCCATCCAT BLAST |
| Tissue | pods |
| Gene name | LI_gene_158506; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_510021
| Blastp | ADP-ribosylation factor GTPase-activating protein AGD7 from Arabidopsis with 61.91% of identity |
|---|---|
| Blastx | Probable ADP-ribosylation factor GTPase-activating protein AGD6 from Arabidopsis with 59.45% of identity |
| Eggnog | domain, ankyrin repeat and PH domain(COG5347) |
| Kegg | Link to kegg annotations (AT2G37550) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019425865.1) |
| Pfam | Putative GTPase activating protein for Arf (PF01412.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |