Ll_transcript_510038

• Id Trinity: TRINITY_DN48143_c2_g1_i9
• Name Transcript: Ll_transcript_510038
• Sequence: GGCACACCTTTTGGTATATAGTATTGTTGATAAACACGCCTAGTCAGCATCCAATATCACCCATTTTGATTTGTCGGTGATTCATTACCCAATTCCCATT CCCATTCCGAATCCCAAACCTAATTCCTCTCTCAAAAAAACACTTCTCCTTCTCCCATTCCACCACCACCCGATTAATATCCACCGTCTCCGATCCAAAT GGCCGCCTCATCACGGCGGCTCCGGGACCTTCAATCTCAATCCGGCAACAAGATCTGTGTTGACTGTTCCCAAAAGAACCCTCAATGGGCCTCAGTCTCC TACGGCATCTTCATGTGTCTAGAATGTTCCGGAAAACACCGTGGCCTCGGCGTTCATATATCCTTCGTCCGATCCGTTACTATGGATTCATGGTCTGATA TTCAGATCAAGAAAATGGAAGCCGGTGGCGGAAACGATAATCTCAATGCGTTTCTCGCCAATTACGGTATTCCTAAAGAAACTGATATTGTTACCAAATA CAATACTAACGCCGCCTCGGTTTATCGCGACAAGGTTCAGGCCATCGCTGATGGCCGTCCTTGGCGCGATCCCCCGGTGGTGAAGGAGAATCTTCATAAC GGTAAGGGGAAACCGCCGTTGGGAGGAGCCAGGGTTTCTGGTGGTGGAGGAGGTTCTGGTTGGGATAGTTGGGATGATGATGGTTATGGATCGAGAAATA ATGATATTAGGAGAAATCAGAGTAGTGGTGATGTTAGAGGAGGGATTGGTGGTGGTGGAGCACCGGCTCGTTCGAAATCGTCGCAGGATATTTATACTCG GTCGCAATTGGAGGCTTCTGCTGCTAATAAGGAGAGTTTCTTTGCGCAGAAGATGGCGCAGAATGAGTCGCGGCCGGAGGGTCTTCCACCGTCTCAGGGT GGGAAGTATGTTGGGTTTGGATCGAGTCCTGCACCTTCGCAGAGGAATATTAATCAGCAGAATGATTATTATTCTGTTGTTTCTCAGGGGATTGGTAAAT TATCATTGGTTGCTCAATCTGCTGCTAGTGTTGTTCAGGCAAGCACAAAAGAGATCACTGCTAAGGTAAAGGAAGGTGGTTATGATCACAAAGTGAATGA AACTGTCACTGTTGTTACGCAGAAGACATCAGAGATCGGACAAAGGACATGGGGTATAATGAAAGGAGTAATGGCTATGGCTTCACAGAAGGTTGGAGAG TTCACTAAAGACAACCCAAGTTGGAAGTCTGATAACTGGCAACAAAATGAAAATAACAGAAATGGTTTGTATCAGGAGTACAATCAAGAAAATAGCGGCT GGAATTCTTCTTCCAGAGGAGGACAACCTTCATCTGTTGGACAAACTAATACTTATCACTCAAACTCTTCAGATGATTGGGGCCTTAAAGATTCTAGGAA GGAAGAACTAGCGAAAGGGTCAAGTCCTCAGTCATCTAATACTCGCAATTCTAGCTCTTGGGATGATTGGGACCACGAATATCCTGTGAAAAAAGAACCA GCTAAAGGACCAGCTTCCCATACTAGTGATGCTTGGGCTGGCTGGGATGATGGATTTGATAGTCGGAATGCATCTAATAATAAAACTGTTGGTCATAATG GGAAGTCAGATTCCGCTTGGACTGGAGGAGGATTTCATTAAGGTTGACCCTATATTGTTGTTATCAGTTTCAAAATTTTGTCATGTGACAAAAATATGGT AACTTTCTGACCGAACATGATCGATGTGACAGGATTGTCAAATATAAGTTTCTTGGTCACTGTTAAAAACCAGACCTCACAAGTGCAGGGAGAATGATTT TATTGAGGTTAGTATATTGTCAGCAAGACCCTTCTGTAACTTATGTTCTTTTTAATATTTTGGGAACTTCTGTATTTTTAAGGAAATGTACTTTTACAAT TACATGTACAAGTATCCAAAGAAAGGGCTAATTGCCCAAATTTAAGAGAACTATCACCTGGAAGTGTGGTGAAACATTATCATGACATCAAAATTTCATT ATTGTTTTAAATTTGTAGCATGTGGTTTTTGCATCGTTATTTTCTCATAATTTATCATTATTATGTGTCAAAAAAAAATACAATTGTGGAGATCAAGCTT CAATCTTTTGCCATCTTATGGAGTATCGTTATTATAAAGTTTTTCTGGTGAACAATTTTATTGATTTTCCATCCAT
• Tissue: pods
• Gene name: LI_gene_158506;
• Additional information: details;

Expression of Ll_transcript_510038

FPKM

• PAB: 38
• PNAB: 28.2
• PS1: 48
• PS2: 62.8
• PS3: 70.5
• PW1: 86.1
• PW2: 99.4
• PW3: 93.6

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_510038

• Blastp: ADP-ribosylation factor GTPase-activating protein AGD7 from Arabidopsis with 61.91% of identity
• Blastx: Probable ADP-ribosylation factor GTPase-activating protein AGD6 from Arabidopsis with 59.45% of identity
• Eggnog: domain, ankyrin repeat and PH domain(COG5347)
• Kegg: Link to kegg annotations (AT2G37550)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019425865.1)
• Pfam: Putative GTPase activating protein for Arf (PF01412.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;