Ll_transcript_510020

• Id Trinity: TRINITY_DN48143_c2_g3_i1
• Name Transcript: Ll_transcript_510020
• Sequence: CCGAGATTAAGATCATGAATGCCGGCGATGGCTTTTAGAACAGCGGGGAAGGCATAGTTGTCGGGTTTTGCAGCAGCGGCGAGCATGTTGGTGTAGGTGG AGATGGCTTCGTGGAAAGAGGAGGAATGGGTTTGAGAACGAAGGAGGTCGATCCATGATGATTGTGGGAGTGTGGTGGTGACGGTGACCGCGGCGGCGGC GGTGGTGGTGGTGGAGGAAGTCGTGGGAATAACGGAGGGTGGGATGATGATTGGGGTAACGATGATGGTTTCGGGAATTCTGGTGAAATTAGGCGTAACC ACTCGACTGGAGAATTCAGAAGCGGTGGAGGTGGTGGTGTGGCGCCGATGAGGTCGAGGTCCACGACGGATTTCGCGCGATCGGATTTGCAGGCTTCGGC TGCGAATAAGGAGAGCTTTTTCGCGAGGAAGATTGCGGAGAATGAATCAAGACCAGAGGGGCTTCCACCATCGAAGGGTGGGAAGTATGTTGGGTTTGGA TCGAGTCCTGCACCTTCTGCCCAGAGGAGCAGTCAGCAAAATGATTATTTTTCTGTTGTTTCTCAGGGGATTGGTAAATTGTCGTTGGTTGCTGCATCTG CAGCTCAAGAGATCACTTCTAAGGTATTTGCTTATACTTTATCTTTTCATTCAAAGGCAGAATTGTACTTGTTTTCAAAACAAAAAATTTATCTTTTGTG TGTATCAATCTGATTGTTTTGTATAGCTCCTCTCTGTTTTTCATAAAATGCATGTTGGATATTCTTTTCATGCAACATTTGATTGTGTTGACTCATCTAG AGTTTATTGTATTTTTTAAAATAAGACACTCTTGGATTCGTATAGAGTTTATTTTGTGTGTTCTTTAAAAGTAAGACACTCTTGTCTTGTTCACAATTAA AATTAAATTAATGAAGGAATCAACGAGGCAGCAATGAATGTTTTTCAACCAATTATATATTTGTTGTATGAGTTATTCTGGTCTTATATGTGGATGAGAT CCTTCTTCAAACCAAAGACTAGGGGTTGTTGCATGAGGTGAAACAGTTTCTTGGTCTGTCGCAGAAGCTCTATATTAACAAGATTTGAGAGATTTTGGAT GAAGAATTGTTCACCAAGTTTAGCACCCATTGTGAAGGATGATAGGTTCAATTTGAACCATTGCCATAATAATAAGCTTGAAAGGGAACAAATGAAAAAT ATTCCATATGCTTCTGCTGTTGGAAGGCTTGTGTATGCTCGGGTTTCTACAAATATTTAAGTAGCGGGGGCAAAGATAACACAAATACAAATACATGAGT GAAAATGACAAACCACTATCATTCATTAAAGAAAAATTCTCAACCTAGTGGGGTCATTTGCCTACACTAGGCTGTATTTGGTCAATCCCTAACTAGAACC ACTCTCTTTATTTGGATGGTGCAATTTTGCCTACTAGTGTTTGGGCTAGCAAAACCAGATATTATGATACCTGTGTTTGTGACCAATGCTACTGATGTGT CCGTGAAGCACTGTTATTTTTTGTTTGATAACTGGTGTTTACTAGTTCAAATTTTCAGACATAAGCAAGGCAATCAATAACATTAGTTATGGCGAGAGGT ATTTATAAAGATTTTAAAATTATATGTGTGCAATCTATGATAATTTGATACTTTTTATATGAATTAATAAAAGTGAACAAGTCTCGGCACAACAGTAAAG TTGTTGCTTAGTAAGCAAGGGGTGACGAGTTCAAATCTTGAAAATGGTCTCTCTGCTTGCAGGGGGTAAGGCTGCATACGTTGACCTCCTTAGACCCCAC TTAGTAGAGCCTCGTGTACCCAGCTGCCCTTTTTTATATGTATTAATAAAACTGAACTCAGAAATAGAAAAATATTACATTTGGTATCAGAGCAGCATAT TACCTCTGTCTAGCATTTTTCGTTTCTGCCTATATGTTTCTTGTATCTAGAAAGAATGTTTACACTTTACATACATGATTTATGTTACATATGCATGATT ATCGGTTATGTTATGCTGATGCTTGACAGTACACCTTCCTTCTCCCTCATTAGTTGCTCAAATATCAAATGTAGTGTTTTTCTACCTTCTAATTAATTTA TTAACTGATATAAACAAGCAGTAATTATTATCTCAGCATGTCCATACATTAATAGGATCTTTATAAATACTTCTCATCATAGCTAATGTTTTTTATTGCT TTGGCTTGTGTCGGAAAATCTGAAGTAGTACAATATGATTGAAACAAAAATCAAGTGACTCACAAATATTGCAGCAACCAGTGTTATCGAGTTGCAGCCA TGGCAGCATCATAGCGGAAAGCATTGGCGTTTTTTGGCCAACCGCTATTTGCTATATGGAAAAACCTTCCAATGATGATGTCCGTCATTTGCTGCTTTAG GGTCACTGGCGGGGGTGGCTCATGGCAGAAAAGTTGTCATGACGTTTTTTATGGGCTTTCTAAGGGGTTGGGATTCATTTTGGGTGGGTTTTTTAGCCCA AAATTGTGAGACCTAAACTCAAACCCGTTTGCTTCATTCGAACCCTCTCTCTCATTTGCTTCATTCGAAACTGGAGGCTTCCTTCAAACCTAATCTTCTC TCTCAAAGTCTGCTTCGTCTTCGTCTCTCAAGGTCTCTGCTTCATTCGAAACTGGAGGCTTCTTTCAAACCTCATCTTCTCTCTCAAAGTCTGCTTTGTC TTCGTCCTCATCTTCGTCTGCCTTTGGTTGCTGCTTCTTCGTCTGCCTTTGGTTGCTTCATCTTCGTCTGCCTTCGGTTGCTTCATCTTCGTCTGACTTT GTTTGCTTTGTCCTCATCTTCAGCAACTAAGCAGATGCTTCGTTTATCTTTTATCTTTGACATATGTCCTTAAATTTTGATTTTTAGTTGTGTGACAAGT GGTCATCTATGAAGCACGGATACGTGCAACACCCTTACGTACCGGTGTCCGACA
• Tissue: pods
• Gene name: LI_gene_158508;
• Additional information: details;

Expression of Ll_transcript_510020

FPKM

• PAB: 0.6
• PNAB: 0.8
• PS1: 0.8
• PS2: 0.8
• PS3: 0.8
• PW1: 0.6
• PW2: 1.3
• PW3: 0.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_510020

• Blastp: ADP-ribosylation factor GTPase-activating protein AGD7 from Arabidopsis with 63% of identity
• Blastx: ADP-ribosylation factor GTPase-activating protein AGD7 from Arabidopsis with 59.5% of identity
• Eggnog: domain, ankyrin repeat and PH domain(COG5347)
• Kegg: Link to kegg annotations (AT2G37550)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019462205.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;