Ll_transcript_510022

• Id Trinity: TRINITY_DN48143_c2_g3_i2
• Name Transcript: Ll_transcript_510022
• Sequence: CCGAGATTAAGATCATGAATGCCGGCGATGGCTTTTAGAACAGCGGGGAAGGCATAGTTGTCGGGTTTTGCAGCAGCGGCGAGCATGTTGGTGTAGGTGG AGATGGCTTCGTGGAAAGAGGAGGAATGGGTTTGAGAACGAAGGAGGTCGATCCATGATGATTGTGGGAGTGTGGTGGTGACGGTGACCGCGGCGGCGGC GGTGGTGGTGGTGGAGGAAGTCGTGGGAATAACGGAGGGTGGGATGATGATTGGGGTAACGATGATGGTTTCGGGAATTCTGGTGAAATTAGGCGTAACC ACTCGACTGGAGAATTCAGAAGCGGTGGAGGTGGTGGTGTGGCGCCGATGAGGTCGAGGTCCACGACGGATTTCGCGCGATCGGATTTGCAGGCTTCGGC TGCGAATAAGGAGAGCTTTTTCGCGAGGAAGATTGCGGAGAATGAATCAAGACCAGAGGGGCTTCCACCATCGAAGGGTGGGAAGTATGTTGGGTTTGGA TCGAGTCCTGCACCTTCTGCCCAGAGGAGCAGTCAGCAAAATGATTATTTTTCTGTTGTTTCTCAGGGGATTGGTAAATTGTCGTTGGTTGCTGCATCTG CAGCTCAAGAGATCACTTCTAAGGTCAAGGAAGGTGGTTATGATGACAAGGTCAATGAAACTGTCAATGTTGTCTCTCAGAAGACGTCAGAAATTGGACA AAGGACATGGGGTATAATGAAAGGAGTAATGGCTATGGCTTCACAGAAGGTTGAGGAGTTGGCTGGAGATGGTCCAAATTCGAAGACTGATAACTTGCAG CGAAATGAGAATAATAGAAATGGTCACTCTCAGGATTTCGATCAAGAGAATAAAGGCTGGAACTCTTCGATGGGAAGAGAACAATCTTCATCATGGCAAT CTAAAACTCATAGCGCAAGCTCTTTGGATGAGTGGGGCTACAAAGATAGTAGGAAGGAAGAGCCAGCTAAAGGATCGACTCGTTCGTCAAGTGGGCAGTT CAATACTTCCAACTCAAGCTCTTGGGATGATTGGGACCACAAAGATTCTAAGAAGGAAGAACCAGCTAAAGGATCGGCTCTCAATAGCAGTGATGGTTGG ACTGGCTGGGACGATGCCAAAGATGATGGATTTGATAATTTTGATGATGCTCCGTCTAATAAGAATGGTGCTGGTCATAACGGAAAATCAGAATCAACCT GGACAGGAGGTGGCTTTCGCTAAGGTTTGTAAATTATGCAATACTTCGGATACTCGGATTACCATTTTCCCGGATATGAGAGGAAGAATAAATGGAACTA ATGGTAGTTTTCATTTTTATTTGGATGGCTTACTATTGTTCACTGAAACATATTCTCAGCACACCTCGCAATCTTCTGTGAGCCGTTGCATAACAACTTG CTCTTGCGTAAACTTTCTCTAAATAGCTTATATCCTATCATTCTACTCAATATCCTCACTAGGTTATGAACAAGTTTTCCCTTTTTAAGTTCCATGACCA CAATGGACTTCAAATGCACTGTACTTGTTTGTGTGTATTGTGGAAGGCAGAGAGAGGGAAAGGGATTGACTGCATAAAAGGACTCACTGTATTGTGAATG GAAATCATTATTTGTGGTTGTGTTCTGTTATTATTTTGATGTCTAATGTATGTTTAGTTCTTCCTCTGATTTCCAGTATATATTTTGAAATAATTTATCA CTTGTTACTTCTTGGACCAGGTCTGATCCATCTTTATTACCAGTTTCGTGTTTTTTCTGTAAGTGACAAGAAATACAGTAGCTTTCGGATTGATGGCATG CGAGCTAAGCAGTGGTGTCACTAGAAATGATATATGTCACCCGGTGGTTAGCTATAACTTACAACGGTATTGATCTCTATTAAACTTGGATACTATGTGC AGGAAGAATGGTTTTGTTTAGTGTATTTTCAGCAAGTCTCTATATTATCTTTTCCCCTATTCCTTTCCCTTTGTGACTTTTTTCCTATGTAATTTTTTTG GGAACTTCCATTGTAAAAGTAGTTTTACATGCACAAGTGTCCAAAGAAAGGGCTAATTGCCCAACTCTCGATTCTTAAGAGCACTATTACCTGACAGTGT GATGAAATGTTATTTGAAATGAAAACTTCAGAATTGTTTTTAAAA
• Tissue: pods
• Gene name: LI_gene_158508;
• Additional information: details;

Expression of Ll_transcript_510022

FPKM

• PAB: 0.6
• PNAB: 0.8
• PS1: 0.4
• PS2: 0.9
• PS3: 0.5
• PW1: 0.9
• PW2: 1
• PW3: 1.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_510022

• Blastp: Probable ADP-ribosylation factor GTPase-activating protein AGD6 from Arabidopsis with 51.61% of identity
• Blastx: Probable ADP-ribosylation factor GTPase-activating protein AGD6 from Arabidopsis with 47.58% of identity
• Eggnog: domain, ankyrin repeat and PH domain(COG5347)
• Kegg: Link to kegg annotations (AT3G53710)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019462205.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;