| Id Trinity | TRINITY_DN48143_c2_g3_i6 |
|---|---|
| Name Transcript | Ll_transcript_510029 |
| Sequence | TGGGAAGATGATTGGGGTGTTGATGATGGTTTTGGGAATTCTGGTGATATAAGGCGTAATCGTTCGACCGGGGATTTCACGAGAGGTGGTGGTGGCGGGA TGCCGGTGAGGTCGAGGTCGACGACGGATTTCGCCCGATCGGAGTGGGAGGCTTCGGCGGCAAATAAGGAGAGTTTTTTTGCGAGGAAGATGGCGGAGAA TGAATCAAGATCTGAGGAGCTTCCACCGTCGAAGGGTGGAAAATATGTTGGGTTTGGATCGAGTCCTACGCTTTCTTCTCAGAGGAGCAACCAGCAAAAC GATTATTTTTCTGTCGTTTCTCAGGGGATTGGTAAATTGTCGTTGGTTGCTGCATCTGCAGCTCAAGAGATCACTTCTAAGGTCAAGGAAGGTGGTTATG ATGACAAGGTCAATGAAACTGTCAATGTTGTCTCTCAGAAGACGTCAGAAATTGGACAAAGGACATGGGGTATAATGAAAGGAGTAATGGCTATGGCTTC ACAGAAGGTTGAGGAGTTGGCTGGAGATGGTCCAAATTCGAAGACTGATAACTTGCAGCGAAATGAGAATAATAGAAATGGTCACTCTCAGGATTTCGAT CAAGAGAATAAAGGCTGGAACTCTTCGATGGGAAGAGAACAATCTTCATCATGGCAATCTAAAACTCATAGCGCAAGCTCTTTGGATGAGTGGGGCTACA AAGATAGTAGGAAGGAAGAGCCAGCTAAAGGATCGACTCGTTCGTCAAGTGGGCAGTTCAATACTTCCAACTCAAGCTCTTGGGATGATTGGGACCACAA AGATTCTAAGAAGGAAGAACCAGCTAAAGGATCGGCTCTCAATAGCAGTGATGGTTGGACTGGCTGGGACGATGCCAAAGATGATGGATTTGATAATTTT GATGATGCTCCGTCTAATAAGAATGGTGCTGGTCATAACGGAAAATCAGAATCAACCTGGACAGGAGGTGGCTTTCGCTAAGGTTTGTAAATTATGCAAT ACTTCGGATACTCGGATTACCATTTTCCCGGATATGAGAGGAAGAATAAATGGAACTAATGGTAGTTTTCATTTTTATTTGGATGGCTTACTATTGTTCA CTGAAACATATTCTCAGCACACCTCGCAATCTTCTGTGAGCCGTTGCATAACAACTTGCTCTTGCGTAAACTTTCTCTAAATAGCTTATATCCTATCATT CTACTCAATATCCTCACTAGGTTATGAACAAGTTTTCCCTTTTTAAGTTCCATGACCACAATGGACTTCAAATGCACTGTACTTGTTTGTGTGTATTGTG GAAGGCAGAGAGAGGGAAAGGGATTGACTGCATAAAAGGACTCACTGTATTGTGAATGGAAATCATTATTTGTGGTTGTGTTCTGTTATTATTTTGATGT CTAATGTATGTTTAGTTCTTCCTCTGATTTCCAGTATATATTTTGAAATAATTTATCACTTGTTACTTCTTGGACCAGGTCTGATCCATCTTTATTACCA GTTTCGTGTTTTTTCTGTAAGTGACAAGAAATACAGTAGCTTTCGGATTGATGGCATGCGAGCTAAGCAGTGGTGTCACTAGAAATGATATATGTCACCC GGTGGTTAGCTATAACTTACAACGGTATTGATCTCTATTAAACTTGGATACTATGTGCAGGAAGAATGGTTTTGTTTAGTGTATTTTCAGCAAGTCTCTA TATTATCTTTTCCCCTATTCCTTTCCCTTTGTGACTTTTTTCCTATGTAATTTTTTTGGGAACTTCCATTGTAAAAGTAGTTTTACATGCACAAGTGTCC AAAGAAAGGGCTAATTGCCCAACTCTCGATTCTTAAGAGCACTATTACCTGACAGTGTGATGAAATGTTATTTGAAATGAAAACTTCAGAATTGTTTTTA AAA BLAST |
| Tissue | pods |
| Gene name | LI_gene_158508; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_510029
| Blastp | Probable ADP-ribosylation factor GTPase-activating protein AGD6 from Arabidopsis with 50% of identity |
|---|---|
| Blastx | ADP-ribosylation factor GTPase-activating protein AGD7 from Arabidopsis with 47.93% of identity |
| Eggnog | domain, ankyrin repeat and PH domain(COG5347) |
| Kegg | Link to kegg annotations (AT3G53710) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019462205.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |