| Id Trinity | TRINITY_DN48146_c2_g3_i1 |
|---|---|
| Name Transcript | Ll_transcript_510328 |
| Sequence | CTCACTCATTGATTAACACTGAAAGAAAACCACATCGCAACAACAACTCCGCAATTCTCATCGCCAAACCAAACGACATCGTTTTTTACTTTCTTGTGTG TTCTTATTCGTTTCGGGTTTTTATTATCGTTTTCGAATTCGGTGTCTTTTCTGAACCGTGCAGTGTTTACTTTTTCCACAATGGCCACGTTCAAGACCTA TAGCAGTGTCTGCACCACAGGAATCGCTTTTCCAAGGAACTCATACCGGAAGCCTGTACAAGCAGCCATTGTACCTAGTTTCCACCTCCCAATGCGCAGC TCCGAGGTGAAAAATAGGACTTCTACAGAGGACATAAAGAGTCTGAGATTGATAACTGCCATTAAAACTCCGTACCTTCCTGATGGCCGATTTGATCTTG AAGCATATGACAATTTGATGAATACGCAGATTGTAAACGGAGCTGAAGGTGTTATTGTTGGTGGGACAACCGGTGAAGGTCAGTTGATGAGCTGGGATGA ACACATAATGCTTATTGGGCACACAGTCAACTGTTTTGGTGGGAAAATTAAGGTTATTGGAAACACCGGAAGCAACTCGACCAGGGAAGCAATTCATGCC ACTGAGCAAGGTTTTGCTGTAGGAATGCATGCTGCACTTCATATAAACCCTTACTACGGAAAAACTTCCTTGAATGGTTTGGTTTCTCACTTTGACAGCG TGCTTTCAATGGGCCCCACCATTATATATAATGTGCCATCGCGAACTGGTCAAGACATTCCACCACATATAATTCAAAACTTAGCTCAAAATCTTAGCTT GGCTGGTGTCAAGGAATGCGTTGGAAACGACCGGATCAAGCAGTACACAGATAATGGAATTGTTGTGTGGAGTGGGAATGATGATCAATGTCATGATGCT AGATGGGGTTATGGGGCTACTGGAGTAATATCTGTTGTAAGCAACCTGGTTCCTGGTTTAATACGAGAACTCATGTTCGCTGGAAACAATCCTACACTGA ATTATAAGCTCTTGCCTTTGATCGACTGGCTTTTCCACGAGCCAAACCCCATCGGTTTGAACACGGCTCTCGCTCAGCTTGGGGTTGTTAGGCCAGTTTT CAGGCTACCATATGTACCCCTCCGTGTGGAGAAAAGGATAGAGTTTGTCAACTTGGTGAAGAATATCGGACGCGAGCATTTTGTTGGAGAAAAAGATGTT GAGGTTCTCGATGACAACGACTTTATCATAGTTCGTCGATATTAATTTAGGTTACCTTCTTCTACACTTATGTTATCCTTTCATGGGTTTTGCCTAACTT AAAAAACCAGATTGTTATGTTTATTAAAGTCACTGGTGACTTTGCTCTTTAGAACCCTCCTTAGAAGTCTTTGGTTTCAATCCCTTTAGTTTTCTTTGTT TGAAGGCATAACTTTTCTTGTTATCTCAGAAGATTTGTGCTTCTTAAACATTTCAGTTTTATAGCAGTGAAGAACTTTATTATGTGATTATTCAATGAGC TTTCTTGAAATAAATTAAAAGAGATTATTCTCATAAACTTCCCTGATAAGATTATTGAAATAAATTATAAAAGTTCATAAAGTCAGAATCTTATTTTTC BLAST |
| Tissue | pods |
| Gene name | LI_gene_158520; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_510328
| Blastp | 4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic from Soja with 85.67% of identity |
|---|---|
| Blastx | 4-hydroxy-tetrahydrodipicolinate synthase, chloroplastic from Soja with 85.67% of identity |
| Eggnog | Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) (By similarity)(COG0329) |
| Kegg | Link to kegg annotations (548067) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019413110.1) |
| Pfam | Dihydrodipicolinate synthetase family (PF00701.21) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |