Id Trinity | TRINITY_DN48148_c0_g2_i14 |
---|---|
Name Transcript | Ll_transcript_510434 |
Sequence | GTTCATTTTCACAGAGGAAAATCAATTCAAAATTCTTATTACTCTTGTCCAAATACTGTCATTTTGTTGGTGACATATGCAATTACTTTGATCTGGATTC TTCAGCAAAGTTGTGGTCACTTCACACAATTCACAGTTATGCATTATAATTTTACAGCACCTTTATACTTCTCAAGCATTTATGGGTAGAACTCATGCTG CGTTTACTTGTTGGTGTTGTGTGAAGTCCCACATTGGATATGAGCGGAAGAGTGAAAAAGTTTATAAGTAAAAAAGACTTATAGAACTAATGTCATAAGA TTTTGATTCAAGACGTGGTGTCTCACTTATGACTCTTCACTCTTCCCATACCGCAGTAATAATGGAACTCCCCGGTGGTTGGAGACTCCCTCGGTTGCAG TTTGGTCCAATAGTTGGTAAATTAGTAAAGACTAGATGTTTAAAAGGCTTTTATGCATTTGTGTTGACAGCACCTTTGATTGCTTATATGATGTTAAAAC ATAATGAAGTGATGCTAAAACAACATGATATGAGACAAAGACAATGGGGCATAGGATGTGCTTTGTGTAGGACATGATTTTAGGACAATTTGCAAGTATT CTGAACATCTAATGGCATCTTCGGATGAAGAGGGTGAAATTGTTCCAGATTTTGTTAATAATTATTGGTTTGAGAATGATAAGGGGGGACTTGTGTCATT TTCTAGTTTGACATTATTATGGGGCACTAGTGATATCAAATGTGACTTAGAAACAAAAATGTTTTTGCGGGGCACCACTGATGATGGCCTCCAGAAAATT TACAAACAGATTATAGGATGGAGATTTGAACTTCCCCATGGGCAGCCCGAGCCTGAGATTTCAGTTCTTTTGAAGGACAAAAATTGGATAACTCTCCAAA AACCAAGGAAGTGTTTTGAAAGTACAATTAGGACAGTCCTGGTCGCAGTATATTGGCTCCATTTCGTGAAATGGAATCCAGAGGAAGCTACAATCTCTAT TTGGAACAAAGTATTGACGACCTTTGGCTCATTTGAAGTTGCACCATCTGAGAATGATGTTCTAAATCATATGTCATTGATTAGTGAGGCTGCTAACAGG GACAAAGATTTAGCAAACTCTAAGTGCCTGCTTCGCTTCATACAAAAGGCTTCTTCAAATGAAGGCTTCCAACAGATCAGCGATATCCATACTGCAAAGA CATCAAAATTTATAATTGACTCAGAAGAGGAAGAGATTGACGAATCTGATGGTGAACTCAATGCCGAAGAAGAGCAAAATATCGGATATGATACTGTTTG TGCAATTTGTGATAATGGTGGAGATATACTTCCTTGTGAAGGTCCATGTCTTAGATCCTTCCATGCAACCCAAGAGGATGGTAAAGACTCACTTTGTGAA TCTCTTGGCTACAGTATTACTCAAGTTAATGCCATCCCAAACTTTTACTGTAAAAATTGTAGATATAAGCAGCATCAGTGCTTTGCGTGTGGCAAATTGG GTTCATCTGATGCATCATCTAACGCAGAGGTATTTCCTTGTATTGCTGCAAATTGTGGTCAGTACTACCATCCTGAATGTGTTGCAAGGCTACTCTCCCC TGGCACTGAACAAGAGGAAACGAAGAAAAGAGTTGCCTCTGGGAAATCATTTCTCTGTCCTCTTCATATGTGCTTTTTATGCAGAAAGGGTGAAAATGGA AATGTTCAGGATTTACAGTTTGCAATATGTAGACGTTGCCCTAAGGCTTACCACAGGAAATGCTTACCCAAGGAAATTTCCTTCACATATGATTATGATA AGGGCATTGAGCTAAGGGCTTGGGATGGTCTACTTGACCATCGAATTTTGATGTATTGCATGGATCATGAGTTGGTTAGGGAACTTGGGACTCCAGCCAG AAACCATCTGGCATTCCCTGATATGGAAGTGAAAAGGAAGATAGGCAGTTACAATTTATTAGACAAAGCGAAGGGTGCTAAAACATCGAGGCAAAGTTTT GAATGTCGTCCTCCTAAGAGAATATTGGTACCAAATCAGGTTACAAAGGAAAGTGCTAGGATCCAAGGTGGCGGTTATTCCAAAGTTATGGAGAAAATAA GTTTTAAGAAAGATAAGTGTTTATCATCTGGATCACTCCAGATTGACATGACTAGAAAACTTTCAAAGGATGAGGTGTCTGTATCCAATAAGTCCTTACC AAGTGCTGAAAATAAGTTTTCTCCGAGAAATGATTTGTCCAACAGTTCGAGGTTATTTCATGCTAGATCTCAGCAGCAAAAAAATGTTAGCCAAAGAATT GAAAAAACATGCTTGGAGAAGCCTCTGGTGAAAAAATTAAAATATTCACTCAACTTTGACAATGCTGATATGGAAGAACGAATTTTGTCTTTGATAAAAG AAACCACATCTACTTTGATTGAGGAAGAATCCAAGAAGAGCTGTTTTACAGATACTGTATTTAATAAGAACCTTACTCAGGGAAAAGTAGAGGGCTCTGT TAAGGCTATTCGAACAGCGCTACAAAGGTTAGAAGAAGGATGTAGTATTGAGGATGCCAAAGCTATTTGTGAGCCAGGGATCCTTTCTCAACTTTTTATG TGGAAGGTCCAAGCTAGATGTTATTCAATATGGCTGACCAGTAATACAGTGACCATGAATTCTGCTTCGAAAATTTCTCAAAGATCCTCACACTGATATC CCAAGTTTTCTCCACCCATCATCCCTCATCGTCTCCCTTTGATTCTGTGTTGCCACCGGAAGCATGGTTTGAGGAAAGTTTAATGTGCCACGGAAATGTC TTTGCTAGCTTTAACTCAAGCTGAATAACGGGTGGACTAGAAGCAGCTCAAGGTCTTTCTTGCACCTTTTCTTTATGGCATGCGGTACACTTCCTTTGGT CGCCATTTTACTAAAATAGACAAGTTGAAAGAGGTTGTTGATAGGCTTCATTGGTATGTGCAAAACGGTGACACGATTCTAGACTTCTGCTGTGGCTCTA ATGACTTCAGTTGTCTAATGAAATCAAAGCTTGAACAGATGGGGAAGTCATGCTCATTTAAGAATTATGATTTGTTCCAAGCCAAGGTACATTGCTTTTT CTTTTGTCACTTTATCCATTTAGCCTCTCTTGAAGTCAGATAAGTGCTAATTTTTGAGGAATTTTGTTAACGTTGGGAAATGGTTTCTCATCTAGAGTCC TTGTTGAATGCTAAGAAGTTATAGAGATATTGTAGCATCATTTATAATCTTAATGGCCCAAATTGCCTAGTGAAGAGGCAGATATATGGGTAATGGGCAT TCTTTGGTTCATCTAGCATTTATATTGACTGAAGGTATTAAAGGACACATGCAATGTATAAAAACTAAATATAGTGACCTTTAATATTGAATTCATATGG TATCTGTCCATTTTGGACTGTCTATGAAAGGTATACATGATATAGTTATTTCTTTTATTTGTGACTGCTTCCAGTTCTGTTAATTTGTTCCCACTGTAGA TTTAATTTCCCTATTACCTACTCCTTTCTCTGCTTCAAATTCCGCTTTTATTTCTGAGGGAGTCTTTCTGTTTCTAGAATGATTTCAACTTTGAAAAGAG AGATTGGATGACTGTGAATGCAGAAGAATTACCCAATGGCAACCACCTTGTAAGACCCTAAAGCTTTCACTTCAAAATTTATATAGACATATATAGATAT AAAGAGGGCGAGCCTCGGCGCAACAGCAACGTTACTTACCTTGTACTTGGAGGGCATGGGTTCAAATCTCTTCGTTTGAGAGCCTCGTATACTGAGGTGC CCTTTTATATGAATATCCTTATGTTTAATTTGTTTCCATTCATTGTTGATACATGACTAGATCATAGGGCTGAATCCTCCTTTTGGAGTCAAAGGTTCCC TTGCTAACAAATTTATTGACAAGGCACTGACATTTAAGCCAAAACTTCTTATACTTATTGTGCCAAAAGTAACTAAACGGTTAGTATCCTTTCATTTTAT TTCTTGTTTCTGATGTGATGAGGAAAAAATCTTATGCGCCTGCACCTATTTCTACTTTGGCAGACTAGACAGAAAGAAAGGTGGTGGATATGATTTAATC TGGGAGGATGATAAGATGCTTTCAGGAAAGTCATTTTATCTACCCGGTTCCGTTGATACGCGCGAGAAGCAATTGGAAGACTGGAATGTGGATCCACCGC CTCTCTACCTCTGGAGTCGCCCGGATTGGACTGGTTGGCACCGGAAAATTGCTCAAAAGTATAGCCACATGAGGGAGAATTATGATGCACATGGGAAAGG AAAAGATATAAAGAATTATCTTATGGAGGAGAATCATGACTGTTATCAGAATTACCTTGGATTGCATGCGCCTGATGATTTTTCAAGCATATTTGATGGT GTTCCAGATGATAGTGGTGACATTGCACATTTGGTAGGCCAAACAAGCATTATTTCTAGCCAGTTGAAGGAGACAGTGTTTCCTTATTGTGGAAGAGATA TAGATTGTGAGGATCAGCTACTCCCTGGTGAAGATGGGGAAATGGATATGGAATTATCATCTACTGAGTGAGGATTACTGCATGGTGCTCAAAGAGAGCA CATCTGCTTTCCCATGAAATGTGTTACTTTATGTGTCATTAGCTGTAATTGGTCAGAAAAATACTTGATCACTAAGTTTTTAACACATGTTTTGAGATAG TAGATGTCATCCCGGGTTGTTGAGTTTAGAGACAGTCATTAAGAAGTAAGACCACTAGTGAAATAGAATGTTATCAGAAGTTATTGAATGAAGATGATGT ATCCAAGAAGTTGAGTTGATAACATTTGATTAATGACTAAGGATACCAAAATCTAAAAATAGCTTTTAAACAAGTTCAACT BLAST |
Tissue | pods |
Gene name | LI_gene_158542; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_510434
Blastp | Protein ENHANCED DOWNY MILDEW 2 from Arabidopsis with 39.15% of identity |
---|---|
Blastx | Protein ENHANCED DOWNY MILDEW 2 from Arabidopsis with 38.72% of identity |
Eggnog | NA(ENOG410YE57) |
Kegg | Link to kegg annotations (AT5G55390) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019453792.1) |
Pfam | Cytosine specific DNA methyltransferase replication foci domain (PF12047.7) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |