| Id Trinity | TRINITY_DN48148_c0_g2_i16 |
|---|---|
| Name Transcript | Ll_transcript_510436 |
| Sequence | GTTCATTTTCACAGAGGAAAATCAATTCAAAATTCTTATTACTCTTGTCCAAATACTGTCATTTTGTTGGTGACATATGCAATTACTTTGATCTGGATTC TTCAGCAAAGTTGTGGTCACTTCACACAATTCACAGTTATGCATTATAATTTTACAGCACCTTTATACTTCTCAAGCATTTATGGGTAGAACTCATGCTG CGTTTACTTGTTGGTGTTGTGTGAAGTCCCACATTGGATATGAGCGGAAGAGTGAAAAAGTTTATAAGTAAAAAAGACTTATAGAACTAATGTCATAAGA TTTTGATTCAAGACGTGGTGTCTCACTTATGACTCTTCACTCTTCCCATACCGCAGTAATAATGGAACTCCCCGGTGGTTGGAGACTCCCTCGGTTGCAG TTTGGTCCAATAGTTGGTATTCTGAACATCTAATGGCATCTTCGGATGAAGAGGGTGAAATTGTTCCAGATTTTGTTAATAATTATTGGTTTGAGAATGA TAAGGGGGGACTTGTGTCATTTTCTAGTTTGACATTATTATGGGGCACTAGTGATATCAAATGTGACTTAGAAACAAAAATGTTTTTGCGGGGCACCACT GATGATGGCCTCCAGAAAATTTACAAACAGATTATAGGATGGAGATTTGAACTTCCCCATGGGCAGCCCGAGCCTGAGATTTCAGTTCTTTTGAAGGACA AAAATTGGATAACTCTCCAAAAACCAAGGAAGTGTTTTGAAAGTACAATTAGGACAGTCCTGGTCGCAGTATATTGGCTCCATTTCGTGAAATGGAATCC AGAGGAAGCTACAATCTCTATTTGGAACAAAGTATTGACGACCTTTGGCTCATTTGAAGTTGCACCATCTGAGAATGATGTTCTAAATCATATGTCATTG ATTAGTGAGGCTGCTAACAGGGACAAAGATTTAGCAAACTCTAAGTGCCTGCTTCGCTTCATACAAAAGGCTTCTTCAAATGAAGGCTTCCAACAGATCA GCGATATCCATACTGCAAAGACATCAAAATTTATAATTGACTCAGAAGAGGAAGAGATTGACGAATCTGATGGTGAACTCAATGCCGAAGAAGAGCAAAA TATCGGATATGATACTGTTTGTGCAATTTGTGATAATGGTGGAGATATACTTCCTTGTGAAGGTCCATGTCTTAGATCCTTCCATGCAACCCAAGAGGAT GGTAAAGACTCACTTTGTGAATCTCTTGGCTACAGTATTACTCAAGTTAATGCCATCCCAAACTTTTACTGTAAAAATTGTAGATATAAGCAGCATCAGT GCTTTGCGTGTGGCAAATTGGGTTCATCTGATGCATCATCTAACGCAGAGGTATTTCCTTGTATTGCTGCAAATTGTGGTCAGTACTACCATCCTGAATG TGTTGCAAGGCTACTCTCCCCTGGCACTGAACAAGAGGAAACGAAGAAAAGAGTTGCCTCTGGGAAATCATTTCTCTGTCCTCTTCATATGTGCTTTTTA TGCAGAAAGGGTGAAAATGGAAATGTTCAGGATTTACAGTTTGCAATATGTAGACGTTGCCCTAAGGCTTACCACAGGAAATGCTTACCCAAGTAGTTTT TTCTTGTTTTCATTTTATTATACTTTTTATCTATTGTTTTAGGTTACAGTTAATCATGCCATCCGTATTAGGAATGCTCATGAATACTTCTATCTATCTC GTATCTATTTCTTTCTTCAGGGAAATTTCCTTCACATATGATTATGATAAGGGCATTGAGCTAAGGGCTTGGGATGGTCTACTTGACCATCGAATTTTGA TGTATTGCATGGATCATGAGTTGGTTAGGGAACTTGGGACTCCAGCCAGAAACCATCTGGCATTCCCTGATATGGAAGTGAAAAGGAAGATAGGCAGTTA CAATTTATTAGACAAAGCGAAGGGTGCTAAAACATCGAGGCAAAGTTTTGAATGTCGTCCTCCTAAGAGAATATTGGTACCAAATCAGGTTACAAAGGAA AGTGCTAGGATCCAAGGTGGCGGTTATTCCAAAGTTATGGAGAAAATAAGTTTTAAGAAAGATAAGTGTTTATCATCTGGATCACTCCAGATTGACATGA CTAGAAAACTTTCAAAGGATGAGGTGTCTGTATCCAATAAGTCCTTACCAAGTGCTGAAAATAAGTTTTCTCCGAGAAATGATTTGTCCAACAGTTCGAG GTTATTTCATGCTAGATCTCAGCAGCAAAAAAATGTTAGCCAAAGAATTGAAAAAACATGCTTGGAGAAGCCTCTGGTGAAAAAATTAAAATATTCACTC AACTTTGACAATGCTGATATGGAAGAACGAATTTTGTCTTTGATAAAAGAAACCACATCTACTTTGATTGAGGAAGAATCCAAGAAGAGCTGTTTTACAG ATACTGTATTTAATAAGAACCTTACTCAGGGAAAAGTAGAGGGCTCTGTTAAGGCTATTCGAACAGCGCTACAAAGGTTAGAAGAAGGATGTAGTATTGA GGATGCCAAAGCTATTTGTGAGCCAGGGATCCTTTCTCAACTTTTTATGTGGAAGAAGCAGCTCAAGGTCTTTCTTGCACCTTTTCTTTATGGCATGCGG TACACTTCCTTTGGTCGCCATTTTACTAAAATAGACAAGTTGAAAGAGGTTGTTGATAGGCTTCATTGGTATGTGCAAAACGGTGACACGGTGTGTAGTT ACGCTTCTCTATTTTGGTTGTAGAAATGTTAAGGAAATTAAGGATGATAATGACTAAATTTGTAACTCTCCCTCTCTTTATAGAGGTTAGCCAACATATA AAAATAGGCCTAGCTGTAACACATAAAAAATTTACTCACTATTCTCCAACTCTTCCTTTTATCCTGAAGGCATTGATATTAGTAAATTTTATCCATACAA ATGTGGTATTCTTGCCAGATTCTAGACTTCTGCTGTGGCTCTAATGACTTCAGTTGTCTAATGAAATCAAAGCTTGAACAGATGGGGAAGTCATGCTCAT TTAAGAATTATGATTTGTTCCAAGCCAAGGTACATTGCTTTTTCTTTTGTCACTTTATCCATTTAGCCTCTCTTGAAGTCAGATAAGTGCTAATTTTTGA GGAATTTTGTTAACGTTGGGAAATGGTTTCTCATCTAGAGTCCTTGTTGAATGCTAAGAAGTTATAGAGATATTGTAGCATCATTTATAATCTTAATGGC CCAAATTGCCTAGTGAAGAGGCAGATATATGGGTAATGGGCATTCTTTGGTTCATCTAGCATTTATATTGACTGAAGGTATTAAAGGACACATGCAATGT ATAAAAACTAAATATAGTGACCTTTAATATTGAATTCATATGGTATCTGTCCATTTTGGACTGTCTATGAAAGGTATACATGATATAGTTATTTCTTTTA TTTGTGACTGCTTCCAGTTCTGTTAATTTGTTCCCACTGTAGATTTAATTTCCCTATTACCTACTCCTTTCTCTGCTTCAAATTCCGCTTTTATTTCTGA GGGAGTCTTTCTGTTTCTAGAATGATTTCAACTTTGAAAAGAGAGATTGGATGACTGTGAATGCAGAAGAATTACCCAATGGCAACCACCTTGTAAGACC CTAAAGCTTTCACTTCAAAATTTATATAGACATATATAGATATAAAGAGGGCGAGCCTCGGCGCAACAGCAACGTTACTTACCTTGTACTTGGAGGGCAT GGGTTCAAATCTCTTCGTTTGAGAGCCTCGTATACTGAGGTGCCCTTTTATATGAATATCCTTATGTTTAATTTGTTTCCATTCATTGTTGATACATGAC TAGATCATAGGGCTGAATCCTCCTTTTGGAGTCAAAGGTTCCCTTGCTAACAAATTTATTGACAAGGCACTGACATTTAAGCCAAAACTTCTTATACTTA TTGTGCCAAAAGTAACTAAACGGTTAGTATCCTTTCATTTTATTTCTTGTTTCTGATGTGATGAGGAAAAAATCTTATGCGCCTGCACCTATTTCTACTT TGGCAGACTAGACAGAAAGAAAGGTGGTGGATATGATTTAATCTGGGAGGATGATAAGATGCTTTCAGGAAAGTCATTTTATCTACCCGGTTCCGTTGAT ACGCGCGAGAAGCAATTGGAAGACTGGAATGTGGATCCACCGCCTCTCTACCTCTGGAGTCGCCCGGATTGGACTGGTTGGCACCGGAAAATTGCTCAAA AGTATAGCCACATGAGGGAGAATTATGATGCACATGGGAAAGGAAAAGATATAAAGAATTATCTTATGGAGGAGAATCATGACTGTTATCAGAATTACCT TGGATTGCATGCGCCTGATGATTTTTCAAGCATATTTGATGGTGTTCCAGATGATAGTGGTGACATTGCACATTTGGTAGGCCAAACAAGCATTATTTCT AGCCAGTTGAAGGAGACAGTGTTTCCTTATTGTGGAAGAGATATAGATTGTGAGGATCAGCTACTCCCTGGTGAAGATGGGGAAATGGATATGGAATTAT CATCTACTGAGTGAGGATTACTGCATGGTGCTCAAAGAGAGCACATCTGCTTTCCCATGAAATGTGTTACTTTATGTGTCATTAGCTGTAATTGGTCAGA AAAATACTTGATCACTAAGTTTTTAACACATGTTTTGAGATAGTAGATGTCATCCCGGGTTGTTGAGTTTAGAGACAGTCATTAAGAAGTAAGACCACTA GTGAAATAGAATGTTATCAGAAGTTATTGAATGAAGATGATGTATCCAAGAAGTTGAGTTGATAACATTTGATTAATGACTAAGGATACCAAAATCTAAA AATAGCTTTTAAACAAGTTCAACT BLAST |
| Tissue | pods |
| Gene name | LI_gene_158542; |
| Additional information | details; |
| PAB | abscising pods |
| PNAB | non-abscising pods |
| PS1 | seeds stages 1-3 |
| PS2 | seeds stages 4-6 |
| PS3 | seeds stages 7-8 |
| PW1 | pods wall stages 1-3 |
| PW2 | pods wall stages 4-6 |
| PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_510436
| Blastp | Protein ENHANCED DOWNY MILDEW 2 from Arabidopsis with 45.45% of identity |
|---|---|
| Blastx | Protein ENHANCED DOWNY MILDEW 2 from Arabidopsis with 44.68% of identity |
| Eggnog | NA(ENOG410YE57) |
| Kegg | Link to kegg annotations (AT5G55390) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019453792.1) |
| Pfam | Cytosine specific DNA methyltransferase replication foci domain (PF12047.7) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |