Id Trinity | TRINITY_DN48148_c0_g2_i20 |
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Name Transcript | Ll_transcript_510443 |
Sequence | GTTCATTTTCACAGAGGAAAATCAATTCAAAATTCTTATTACTCTTGTCCAAATACTGTCATTTTGTTGGTGACATATGCAATTACTTTGATCTGGATTC TTCAGCAAAGTTGTGGTCACTTCACACAATTCACAGTTATGCATTATAATTTTACAGCACCTTTATACTTCTCAAGCATTTATGGGTAGAACTCATGCTG CGTTTACTTGTTGGTGTTGTGTGAAGTCCCACATTGGATATGAGCGGAAGAGTGAAAAAGTTTATAAGTAAAAAAGACTTATAGAACTAATGTCATAAGA TTTTGATTCAAGACGTGGTGTCTCACTTATGACTCTTCACTCTTCCCATACCGCAGTAATAATGGAACTCCCCGGTGGTTGGAGACTCCCTCGGTTGCAG TTTGGTCCAATAGTTGGTATTCTGAACATCTAATGGCATCTTCGGATGAAGAGGGTGAAATTGTTCCAGATTTTGTTAATAATTATTGGTTTGAGAATGA TAAGGGGGGACTTGTGTCATTTTCTAGTTTGACATTATTATGGGGCACTAGTGATATCAAATGTGACTTAGAAACAAAAATGTTTTTGCGGGGCACCACT GATGATGGCCTCCAGAAAATTTACAAACAGATTATAGGATGGAGATTTGAACTTCCCCATGGGCAGCCCGAGCCTGAGATTTCAGTTCTTTTGAAGGACA AAAATTGGATAACTCTCCAAAAACCAAGGAAGTGTTTTGAAAGTACAATTAGGACAGTCCTGGTCGCAGTATATTGGCTCCATTTCGTGAAATGGAATCC AGAGGAAGCTACAATCTCTATTTGGAACAAAGTATTGACGACCTTTGGCTCATTTGAAGTTGCACCATCTGAGAATGATGTTCTAAATCATATGTCATTG ATTAGTGAGGCTGCTAACAGGGACAAAGATTTAGCAAACTCTAAGTGCCTGCTTCGCTTCATACAAAAGGCTTCTTCAAATGAAGGCTTCCAACAGATCA GCGATATCCATACTGCAAAGACATCAAAATTTATAATTGACTCAGAAGAGGAAGAGATTGACGAATCTGATGGTGAACTCAATGCCGAAGAAGAGCAAAA TATCGGATATGATACTGTTTGTGCAATTTGTGATAATGGTGGAGATATACTTCCTTGTGAAGGTCCATGTCTTAGATCCTTCCATGCAACCCAAGAGGAT GGTAAAGACTCACTTTGTGAATCTCTTGGCTACAGTATTACTCAAGTTAATGCCATCCCAAACTTTTACTGTAAAAATTGTAGATATAAGCAGCATCAGT GCTTTGCGTGTGGCAAATTGGGTTCATCTGATGCATCATCTAACGCAGAGGTATTTCCTTGTATTGCTGCAAATTGTGGTCAGTACTACCATCCTGAATG TGTTGCAAGGCTACTCTCCCCTGGCACTGAACAAGAGGAAACGAAGAAAAGAGTTGCCTCTGGGAAATCATTTCTCTGTCCTCTTCATATGTGCTTTTTA TGCAGAAAGGGTGAAAATGGAAATGTTCAGGATTTACAGTTTGCAATATGTAGACGTTGCCCTAAGGCTTACCACAGGAAATGCTTACCCAAGGAAATTT CCTTCACATATGATTATGATAAGGGCATTGAGCTAAGGGCTTGGGATGGTCTACTTGACCATCGAATTTTGATGTATTGCATGGATCATGAGTTGGTTAG GGAACTTGGGACTCCAGCCAGAAACCATCTGGCATTCCCTGATATGGAAGTGAAAAGGAAGATAGGCAGTTACAATTTATTAGACAAAGCGAAGGGTGCT AAAACATCGAGGCAAAGTTTTGAATGTCGTCCTCCTAAGAGAATATTGGTACCAAATCAGGTTACAAAGGAAAGTGCTAGGATCCAAGGTGGCGGTTATT CCAAAGTTATGGAGAAAATAAGTTTTAAGAAAGATAAGTGTTTATCATCTGGATCACTCCAGATTGACATGACTAGAAAACTTTCAAAGGATGAGGTGTC TGTATCCAATAAGTCCTTACCAAGTGCTGAAAATAAGTTTTCTCCGAGAAATGATTTGTCCAACAGTTCGAGGTTATTTCATGCTAGATCTCAGCAGCAA AAAAATGTTAGCCAAAGAATTGAAAAAACATGCTTGGAGAAGCCTCTGGTGAAAAAATTAAAATATTCACTCAACTTTGACAATGCTGATATGGAAGAAC GAATTTTGTCTTTGATAAAAGAAACCACATCTACTTTGATTGAGGAAGAATCCAAGAAGAGCTGTTTTACAGATACTGTATTTAATAAGAACCTTACTCA GGGAAAAGTAGAGGGCTCTGTTAAGGCTATTCGAACAGCGCTACAAAGGTTAGAAGAAGGATGTAGTATTGAGGATGCCAAAGCTATTTGTGAGCCAGGG ATCCTTTCTCAACTTTTTATGTGGAAGGTCCAAGCTAGATGTTATTCAATATGGCTGACCAGTAATACAGTGACCATGAATTCTGCTTCGAAAATTTCTC AAAGATCCTCACACTGATATCCCAAGTTTTCTCCACCCATCATCCCTCATCGTCTCCCTTTGATTCTGTGTTGCCACCGGAAGCATGGTTTGAGGAAAGT TTAATGTGCCACGGAAATGTCTTTGCTAGCTTTAACTCAAGCTGAATAACGGGTGGACTAGAAGCAGCTCAAGGTCTTTCTTGCACCTTTTCTTTATGGC ATGCGGTACACTTCCTTTGGTCGCCATTTTACTAAAATAGACAAGTTGAAAGAGGTAAATATGCTCCTCTGAATTTTTCCATAGCATTGTTGCCATGAAG CTAAGCATTTATTACATTTGCCAAGTCCTTTAGTTTGTGTTGTGCTGAATGCATGGACACCAAAATTTATGCTTGTGTTTATGTGCCTGCGTGCAAGTCA ACCAAAATTTTCACTTGAATTTGGGATTTCTGGTCTTTGAATTTTTATCATTTGGCTCAGTCACGCTTTGAGGAGAGGAGTACACATAAGTCAGACTACT GTATTTAATTGAAAGGAAATAACTGAATATTATTTCACTCGTAATCAACTGTACAATGTAACAATAACAACAACAACAACAAC BLAST |
Tissue | pods |
Gene name | LI_gene_158542; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_510443
Blastp | Protein ENHANCED DOWNY MILDEW 2 from Arabidopsis with 39.15% of identity |
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Blastx | Protein ENHANCED DOWNY MILDEW 2 from Arabidopsis with 38.45% of identity |
Eggnog | NA(ENOG410YE57) |
Kegg | Link to kegg annotations (AT5G55390) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019453792.1) |
Pfam | Cytosine specific DNA methyltransferase replication foci domain (PF12047.7) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |