Id Trinity | TRINITY_DN48155_c0_g1_i4 |
---|---|
Name Transcript | Ll_transcript_510478 |
Sequence | AATAGTCTCTATGCTTGCGAGGGTAAGGTTGTGTATATCTACTCTCCTCATACCCCACTAGGTGGGAGCCTCGTGCAATGGGTCACCCTCTTTTGTTTCT TTCTTTAATAGTTTCCCATTGGATTGCAATTTGTATTTGGGATGAAATGAAATAAGTGTCTAATATAGGCTTTCATTATTACTTCGAATAGCATTTAATT TTTTTATTTTGAAAAATTATATTGCAGTTGTACCATGATTAGCTTTTCAGAAAATTACCCAATGAAATATTTTAATTTCTTATTTGACCATGCTCAGTTC AACTCTGTGTATTCCTAATCATAGAGTCTTGCATAGTGAATTGTGGCATTTTGTTCTAAGGGCCAGAGATAAACTCTTTATGAAAAAGTGTATGAAATAT CTCTGAAAATTTCACCCCTGGTTTTTAAGGGAAACCTACTTAACTCTAAGAAAGCCTGGCCCCTAAAATATCTTCTGGAAAAAAACTCTTGCTGCATTTC ACTTTGGCCTTAATTTATAACCTTAATAAAAAGTTCAAGCACAGACGCATTTGTTATATGGAATAAAAAGATCGATAGTTTATTGGAAACTACAACTTTT GAGTTTCCTATATGTTAAATCCACCACTTTCCAATAAAAACATTCTATCGTTGATTCGGAGACTCCCAAAACCCCAATTTTATGGTCGCGGAGTGCAATT TAAAACACTGACGCTGTTTAGCAAGATCGATTACTTTTATGCTGTTGTAACATAGATGATAATAATCAGGAAGGAGGACAGTGTGTTTAAGCAGTTCTGT TTTCTTTTTTAGTGTACTGATGCCATTTTCTTCTTTTAGTCATAATATTCTCTTTATATTGTCTGTTATTTAACTTCTTGCTTGATGTTATTTGGGTTTA TTTGCATATCTGGTTTCTTTCGCTTATTCATGTAGATTTTGGGATGACTGATTCTGCATAGCTAATTCAAACATTCTTTGCTAATGCTTGTTTTCTGAAA ATATGCAGTTTAAAATGTCAGATGAAGAGGAATATCGTTGCTTTGTTGGTGGCCTTGCATGGGCAACATCTGATAGGAACTTAAAGGATGCATTTGATAA GTTTGGCAAGCTTATTGAGGCAAAGGTGATAATTGATAAATATCATATTATTGCTTTAGTCATTGATCATTATTGTTCTTGCTGCAGTTGTTGTTATCAG TATCTTATTTCATGTTCAATTGCGCACTTAGAAGTTGGTTTATAATGTGTACTTCAGGCTGAAATTTGCAATGCTTCATTTGTTTGTATTTAATTTTGGT GGACAATTGCAGTATATACTGAACTTGTCTATTACTAAATCAAGTAAACAAGATAAAAAGAAGTTGGTGTAATATAATTCAAATTTAAGGCTTATTTTAT ACGTGATATTTGATTTGAGATTGTTAGCATTTTCTTTCATCATATTTTTTACGCAGGTGGTTGTTGACAAACTCTCTGGGCGGTCTCGTGGTTTCGGATT TGTCACATTTGGTGAAAAGAAAGCAATGGAAGATGCTATTGATGCCATGAATGGGATTGATTTAGATGGCCGAACTATAACTGTTGATAAAGCTCAACCT CAACAAGGATCAACTAGAGATGATGGTGATCGTTTCCGAGACCGCGACCGTGGTCGTGATCGTGGTCGTGATCGTGATTATGGAGGTGGTCGAGGATCCA ATGGTGGTGAATGCTTTAAGTGCGGTAAACCTGGTCATTTTGCTAGAGAGTGCCCTAGTGAAGGGGAAAGAGGAGGAAGGTATGGTGGCAGGGAAAGTAA ATATGGCGGAAGCAGTGCTGGTGGTCGCTATGGTCCTGATAGAAATGGAGATCGTTCGTCTGGTGGTGGGCGCAACAGGGATGCTGGTAGTCGTGGAGAT TCTGGAAATGATCGGCACCATCGTGATCGTGATCGTGATCGTGCTGGGCCATATGAACGACGTTGATCGATTCGAAATTGGAGGGGTTGCTGTTACTGCT TCAACTTTCTCTTTTGTTCACAATGTTCCAGGGTTGTTGTTTTGATGGATCAATGTTACCAGTGTTTTGATAAGCAATACTCGGCACATGTTTGAAACTG TTTTATGTTCCTAAATGCGGATCTTTTCGTCTGTTGAAATCTTATGCATTGGCTTACGGTCAAATTTGATGTGCTCTTTTCTATCAATATTTGCTCGCTG GGTATCTTGTGAATTGTGACTTTCATGCATGGGGAGTAGCATATGACTTATTAAAAGTTCGCTTCTTTTCATTTGGAGAAAAGTTTAAAAGTAGAATCCC ATTTGGCTATCCTGTTTCAGGGCCTTGAGAAAAAAGTAGTGAAGCGGGATTCTTGGCTAAATGTGATCTTTTGGGTACATCATTGGGTTCCTTTGTTGCT AATTGGACATGCATGGTTTTTTAAACAATATACATGCCACTCTTGTTTTCTTCCCAGGGCACTGACAGAAAAGGGTTCTGATTTCTATGATAGTGCAAAT TGTTTGGTTGATGAGTTGGGAAACTGTTCATTTTGGCATGATTCGATCCATATAGCTGAGATGTCGTAGTGGGAAAAACCTTAATTGTTGTTATATTGCT ATGTTTGGTAGAAGATTGCTCTGATCAAACTTGTTTTCTGTTTGCATGTGAGGTTATTTTGTTTGCTTAGATCCAATTTTTCTTACTATAATGTGATATC TTCAACTTTCTCTTCAATCTCACTAGTATCTGATTTGAGATATCTTCCATACTTAACCTCTATACTATGATGATGGAAGGGATTTGGGACATTGTTTAGC AACAGTGTGAAACAATTTAAGGGTGATACTATTGAGCAGAACTTTATATGTAGGACCACAAGATGTAACTACCAGAAGTATCTTCACTATACAAAATAGA ATTACAATATTTGTGTTCCCTTCACAATTCAACTCATAGGAAAGATCTATTTATACTCAAATTAAGTTACACTAATTACATTTAATCTCACTTGTTCATT TTTTTCAAATCCAGACCACAAGAGTGAGTAAAAAAG BLAST |
Tissue | pods |
Gene name | LI_gene_158599; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_510478
Blastp | Glycine-rich RNA-binding protein RZ1A from Arabidopsis with 46.6% of identity |
---|---|
Blastx | Glycine-rich RNA-binding protein RZ1A from Arabidopsis with 67.62% of identity |
Eggnog | Zinc knuckle(ENOG411219Q) |
Kegg | Link to kegg annotations (AT3G26420) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019447411.1) |
Pfam | Zinc knuckle (PF13917.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |