Ll_transcript_508921

• Id Trinity: TRINITY_DN48156_c1_g1_i6
• Name Transcript: Ll_transcript_508921
• Sequence: GTAGCTTAGTTTTGAAGATGCTATCATCTTACATGTTTTCTGAAATCAACAAGTTATATTTTTTTTTTTGCTATTTTTTAATATCCTGCTTTTATTACGG GAGAGGAATCTGATTCAATTTTTGATGATAAGAATACATCACGTTCGTTATATGGTGGTTGAACGTGTGAAGTTGCTGAGTAACGTTCATTATACATGAC GTTAATACTTGTATGTAAAGTAAATTATGACATAAACTTAGAAATATATGTATTATCAGGTATTTTATAATGGTAATTTTTTCATTAACAACAAATTTAT AGTTTGGTAACAAGATGGTGAAAAGAAAAGGTTGTAAGGTGGAAGAAAGGCACAAAAATTGGCCCAATCCAAAATGAACATTAATGGGTTAGGTCCTCTT CGTACAAAGTCGTTGGACGGTTGGTTACTTTAACTCATTCTTCATCAATTTGAATCTGTGTCTTTCTCTCAGTTCAAAACTGCATTGTTACAAAATCATT CACTGTATTCTATTCTATTCATCGGTGGCGATGGGGAACACATCGTCGATGCTGACTCAGTACGACATTGAAGAGGTTCAACAGAATTGCAAACACGCAT TTACTCAACAAGAGATAGTATCTCTGTACCAACGATTCTGTCAACTAGATCGTAACAAGTGCGGTTTCATTTCTTCCGATGAGTTCATGTCCATTCCCGA ATTCGCAGTTAATCCTCTTTCACACAGTTTGTTGACAATGCTCGATGGTTTCAATTTCAAAGAATTTGTTGCCTTTTTGTCTACTTTTAGTTCCCGTGCC TCTCTACAACACAAAATTGAATTCATTTTCAAGGTATATGATTCCGACTGCAACGGGAAAGTCACGTTCGATGATATGTCGAGGGTTTTGCGCGATTTGT CTGGACAGTTCATGTCACAACAACAAAGAGAGGAAGTTTTGGCACAGGTCCTTGAGGATGCAGGCTATAACAAGGACTCTTTTTTAGTCTTGTCTGACTT CATGAAGGTACCATGGTAACTAATGTCTAGCATGACTTACAGCAGTTGAATTCTTAAGTTTAGTTTTGGTTGACATTTTAATAGGCAAGTGACAACTAAG GGCTTGCCTTGAGGTCATACATCTTTCGCATGCATGCTGTCATGTTGGTTTTACACTAGTACCATGCATTCTGAACATATCTTTTGTAGTTTTTGTTCAA CATGTCTTTCTACTTGATATTTGCTAGTGTATTTTCTTTCATATGAAAAATGGATGGCCGATGCCTTTTTTCTGATAGATTTTTGGCAATTCGGAATTGA AGATGGAAGCTGAGATTCCTGTGGATTAGAATGCTGGTGACAATTGCCCCAGAGTATAAAAGTCACTGTCCTGATTTCCTAGATTATTTACTGAGTTCCC ACTCACTGTTATATAGATGCTATAATTGTTTACGAGTCCATTCAGCATTGTTTATTTGTTTCTGGAAAAATGTTTTAAGTAAATATATGAGGTTTTTGGT GTGGCATCTATTGAGTCTCGTTATGAAGTTTGAATGCTTGATGTTTTTCTTATCTTACTTTTTTTAACTAGATTTGGAAGTTGTATTTCATGTACTGACA TGGGTTATTGAAATAAGTTCCTACGTGTTGTCCCCCTCAAAAA
• Tissue: pods
• Gene name: LI_gene_158603;
• Additional information: details;

Expression of Ll_transcript_508921

FPKM

• PAB: 0.2
• PNAB: 0.3
• PS1: 0.2
• PS2: 0
• PS3: 0.2
• PW1: 0.7
• PW2: 0.3
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_508921

• Blastp: Calcineurin subunit B from Naegleria with 37.58% of identity
• Blastx: Calcineurin subunit B from Naegleria with 37.58% of identity
• Eggnog: Calcium-binding protein(COG5126)
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019453680.1)
• Pfam: EF-hand domain pair (PF13499.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;