Id Trinity | TRINITY_DN48156_c2_g1_i2 |
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Name Transcript | Ll_transcript_508932 |
Sequence | ATACTTTGCTGCAGCAAATGAAAATTACTTTGAATAAAACTAACGGCGAGAAAACGGAACTCGCCTCATGGAGAAGTCCTCAGGATCAATCTGTTGGAGA CTTTTTTGCAAGCCTTAACCGGTTAAGTACCCCTGAAGTGTTCATCTGGAGAGGAGAACAACCATACTGGCGAAGTGGACCGTGGAACGGACAAATCTTT CTTGGGATACCTGACATGAACACGGTTTATCTTCACGGATTTATGCTAGGTGGGCAAGATGAAGGAGAGGACTCTTATTATATCACCTATACTTATCCAA ATAAGTCTGATTTGTTAATATATGTGTTGAGTCCTAAAGGAATTTTACATGAAGTGTATTGGGATTATGAACAGAGTAATTGGCTTGAATCATGGTCATC TCAAAATTCTGAATGTGATGTTTATGGCATGTGTGGAGCATTTGGAAGCTGTGATCCTAGTAGTTCACCTATATGTAGCTGTTTGAGAGGATTTGAGCCA ATGAATGAAAAGGAGTGGAATAAACAAAACTGGACCAGTGGATGTGTTAGGAAGGAACCTCTTCAATGTGAGAGAGTCACAAATGGGAGTGAAGCTGGTA AGAGTGATGGGTTTCTGAAGATGCAGAATGCCAAAGTTCCGGATTTTACACAGAGGCTGCCTTATATAGATGATGATTGTAGAACAAAATGTTTGGAAAA TTGCTCTTGCATAGCATATGCATATGATTCTTACATAAACTGTATGTGGTGGACTTCAAACTTAATTGATATGCAGAGGTTCTCAAATGGAGGAACTGAT CTTTACATTCGGGTTTCATATTCGGAACTCGATGAAAAGAAGAATACAACAGTGATTGTCACAACTACAGTCATAATAGGAACAACTCTTATTGTGGCCT GTGCATATATCTTGTGGCAAAGAACCAGAAGTATACAAGAGAAAACAAATCAAGAAAATCAGAAGAGAAACCAGATAAGTAGCTTGAGTAAAGTTAAACT ACAGGAAGTTTCCCAGTATAAGTTTGAAAAGCTTGTTACCGCGACGAACAACTTTCACTTAAGTAATAAGCTTGGAGAAGGGGGTTTTGGACCAGTATAC AAGGGTACATTGGAAGATGGACAGGAAATAGCAGTTAAAAGACTTTCAAGAGCATCTGGACAAGGGTTAGAAGAATTTATGAATGAGGTTATAGTGATAT CAAAGCTTCAACATCTTAACCTTGTTAGACTTCTTGGTTGTTGCACTGATGGAGATGAAAAGATCTTGATCTATGAGTACATGCCTAACAGAAGTTTGGA TGCATATATGTTTGGTCCAGTTGGTGAGGTGTTGAGTTGGGAAAAACGATTTAAAATACTCGAAGGAATTGCTCGGGGTCTACTTTACCTTCATAGAGAC TCTAGACTACGCATTATTCATAGAGATCTAAAGCTAAGTAACATATTGTTAGACGAAGAGTTGAATCCAAAAATATCAGACTTCGGAACAGCAAGAATCT TCGGACGTAGTGAAGATGCAGCCAACACTAATAGGGTTGTTGGTACATATGGTTATATGTCTCCAGAATACGTGATGAGAGGGCTATTTTCGGAGAAGTC TGATGTCTTTAGCTTTGGTGTTTTGCTGCTGGAGATTGTTAGTAGGAGAAAAAATAACAGTTTTTATGAGGATTCTGAATATTTGAACCTTTTAGGATTT GCATGGAAAATGTGGAATGATGGCAACATTACATCTCTAATAGATCCACAGATATCAAATCCTATCTTTCATACAGATATCTTGAGATGCATACATATTG GTCTTCTGTGTGTACAAGAACATGCAATAGACAGGCCTACAATGACTAAAGTGATTTCAATGCTAAATAGTGAGACTCTTAATCTTCCTCCTCCAAAGCA ACCAGCTTTCATTCAAAGGCAGGTTATGTTGGATGTAGAGTCCTCTCACATAAGTGATAGATTATTCTCCATCAACTATGTAAGTTTAACAAAAGTCCAA GCAAGATAGCATAGCTTAATTGCCATAATGTTATTGTAAAATGATTACATTCTTTAAGTAGTAGTGTTTGGTTTTCTTCTTTGTTAATAAATATTACACT CTTTTTTTATTGGACAAAAGGAATATATATTAAGGTTACCCAACCCAATACAAAAAGTGGAATAGGCCTAAAGTTCATGAGATGATTATAAAGAGGAGCC TTTGGTTACTAATCTTTGTGATTTGATACATCACCATAAGTGCAAGAAAGAGATGGAGAT BLAST |
Tissue | pods |
Gene name | LI_gene_158607; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_508932
Blastp | G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330 from Arabidopsis with 51.32% of identity |
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Blastx | G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330 from Arabidopsis with 50.81% of identity |
Eggnog | Serine Threonine protein kinase(COG0515) |
Kegg | Link to kegg annotations (AT1G11330) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019419841.1) |
Pfam | S-locus glycoprotein domain (PF00954.19) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |