Ll_transcript_510077

• Id Trinity: TRINITY_DN48158_c1_g1_i12
• Name Transcript: Ll_transcript_510077
• Sequence: TTCAAATTGGGTTTTTGCATTGTCCTTGAGAGCATTCTTGGTGTGTGCGGCGCGGCGCGATTTCGTTCGGTAGAAATTCAGCGGCGATGTCAGGGAAAGA AGAGAATCGAATATTCGTGGGAGGTTTATCTTCCGACGTTTCCGAGCGTCAGCTCCACCGTGCTTTCGATCGTTACGGCAAGATCCTTGAATGTCAGTTG GGTTTTTTTAAAAGATCTTCCAGAGTGATTTTGTCTTTGCTTGGCCGAAGCCCAATTTCAAATTTTCTGATATCAGGTGGCCTGTCTGTTGTTTGGCAGA GAATTCCTTATTTGTGATGTGTTACTTAAGTTCTTCTGTAAAAACTTTATAATTGGGAATGGCTTTGTGGCAAGAAGATTGTGCTGACAATCAGACAAAG TTAATATTGTAAAATACCATTTGGAGTATAGGCTTGATTCTGTGGTTGATGAACAGAGATGTGTGATATGACATTTTTCAGTTAAGTTATAGTGTTATAC AAATTACAAAGTTCTTCTGCATGAAGATTCGTTTTTTCATGTCCTAATGAAGAAACTTCGTCTTGTCAATCCATTGGCCTTGGTCTCCTTCATGTTGAAG TAGTCAAATCTATTATGTCTCAGTGGTAATTTCTAGTGGAGTATTCGAGTAACTTCTTGTGCTTGGCATTCCTGCTTTTCCTCTGGTTCTTGGTCACTTG TCTGATATGTGTTTGCTTCTGATTTGTTGTGCTTTTGAGGAAAAGGTAAAACATTCTTAAAGGCTGCTATCTTGGTGATGCATTATCAATTTATTTTGTC CCTCGATATGGTACTAAATGCTACTTCCGTTGCGGCTGATTTTTAGTTATAGAGGTAGCAATAACAGGCGTGCCGTCTTATGAACTTCCTTTCAAACAGT AAGTTGCCATTTCTAGTAGTGCCAGAATTTGGAAAGGTTCTATAGCATTGTCCATACTGCAGCATCTGAGAAAGGAATTAGTCTCACATGCATTTGATGG AATCAAGAATTCCGTGCTAATTAGTGTGACCACAGATGAAAGTCTGAGACCCTTGTTGTTCAAAGTGCCAAGTGGTTGCTGATGTTGTGTACATGAACTT TATTAGTATGATGTTCCTTTCAGATTTATTAAGGTGGTTTGTTCGGTCAGTTGATGAATTATAATATATTTGATTTTAGTTGAGCGATCCAATCTCAGAT CATATGTGTCAATATAGGATATTTCCTCAGTGTAACCCAAAGCACAATTAGGCAGACATTTTGTGTTTGTTGGATAGTTCTTCTAATTGATACTCATATC TGCATCATAACAGCCCCATGTGAACTGTGCTGGATTGCTCAGATTGTTCAAATATGAGTCGCGTGTGTCTTGTTTCTTCATGGCAAGGTGCTGAGTCTGA CCAGATTGTATGCATACTATGACTTGAAATGTTGAAGGTTGGACATCACCTTTGTTTTTAGGCATTACTTTAACTATTGGAATAGAGTTGATTGGTTTAA CAGGTTCTCTGGTATTTTTACTGGTTTTTCATTGGTCAGTGTACTTCTAGACAAAGTTATCCATCTCCTTCCTGTCATAATGCTATGTGACAGAAAATTG GATTTTAAAACTGGATTAATATGGCAACTCCAGAAGTGAAAGCGAAACTTGGACTATCTTGAAAGTATTACATTTCTGGGTATATTTGTAAATTTAGTTA TTCTGAGTATGAAAGTTGTAGTACCCGATCTACTGAAAACAAGGTTGTTCAATGAGTGGTGAGTGATTATGGAAGATGCTGAAGTTCTAGCCTGTGTTAT GGAAGTAGTTATACAAAAAGTACTAAATACTGGAACATGGACCTCCAAAAGTGTAAGCATCATAGTGAGTTGCAGGGTTTTCTAACTTAAAAATTTCTAA ACCTTAAGGATTGGTCTTTTGGTTGATGATTCCAAAGGGAGATGAATCGGGTCTTTTTGGTAAGTAGATAGAAAAAGAAAATTGCGTAACTCGAGGTGAA CTAAAAAACAGGGGACTGATGGAAGAGAAATAAAAGGGGGTTGCATAAAAGAACATTAAAACTGAGCATTACCTGCTGTTCGTTGAAGGAGCGCAAACTG CTAAGTGAAAGAGCAAGGACAACAGAGCGCAAGGAGCAAGGAGCAAGGAGTACAAGTGAAAAAGAAAGGCTGAAGCTGATTGATTGTCTGCGGAAGGAAA GGAGCAAGACTAACATAGCACAACTGAGGAAAGGTTGAAAGCCAACAGAGCACAGCTGAGGAAGGGTTGAAAGCCAACGGAGCACAACTGAGGAAGGGTT GAAAGCCAATGGAGAACAGCCGAGGAAGGGTTGAAAGCCAACAGAGTACAACAAAGCAAGGTTGATGCCCTAAAATTAGTTTTGACGGAGCAAGCTGCAC GTAATACTATGTGCCATGCTGATTAGAGCAATGTAAACGTGATCCCTCATCCCAAAAATTGGTTTGCTGATGTTTGATGGGTATAAAAGTACATACTATG GTGCTGGTGCAGCCCCTTGTGCAATTCTGGATTTTAGTGATGTTGGAATATGGTATTTGTCTCCCTGTAGAATAGCAGTCTTTATGGCCACATATTTGAC ATGTATGGGCTTTGAATTCTTCTGAACTGCTATACATGAAAAACATTACAGTGCTTTCTAGTAATAGTATTACCAGACAAAGTAAGTTGTCTGGTCATAA ACTACTGTTTTCTTTTAATGTTGTTTGCATGTGTTGCTATACATGAAAAACATTACAGTGCTTTATAACAGTAGCTGAGAAAGTAAGTTTTTTGGTTATA AACTACTGTATTCGTCAAATGTTGTTTGCATGTGTTGCTCATTGTTAAGCTGATGCGACACCTTTTAAATAAAATACTGGAAATAATTATGCAAGAGAAA TGAAATATATGTATTTGCCCAAAAATAATCATGCAAGAGAAACTAAAATAATTAAAGAATCTCATGCAATCTTATTTCCACCAGTTATGTACATGACGGA CTTCATTTGAAACTTAATGCCTACCTGGAATATTTTAGAAGCCTCTTTCTTTGAATTCATGATTTATTATGTGGCATTTATGTGAGTTCTTTCATGTGTA TGTACTGGCTTACTTAATCATCCATTCATATTAAACTTGTACTATAAGTTGTGCTCAAATCATCTCTTCAAATCTTATAATAATGTCTGTTGGTTACATG CATCAATACCAGTGTTATGTTTATAATAAAAAGTTGTGTTAAATTAATACTAAAATGCTTTTTTTTAACACTTTTATTGTTATTGATTGCTTGGTATGAG ATTCTCTAGTGGTTCTTCATGTAGATAATGGTTGAAAGAGATACAGGCCGTCCACGTGGATTTGGGTTTATTACCTTTGCTGACCGTCGTGGAATGGAAG ATGCAATGAAGGAAATGCATGGACGGGAGCTCGGTGATCGTGCCATCTCTGTCAATAGGGCCCAGCCAAAAATGGGGTCTGATGATGCAGACCATGGTTA CAGAAGTAGCTACTCATCTGGTGGTAGGGGAAACTATAGGGTGGGAGACAGTACAGGACAGGATGACTGCTTCAAATGTGGGCGCCCTGGGCACTGGGCC CGAGATTGCCCGATGGCAGGTGGTGGCCGGGGTGGCGGCGGCTCATTTTTGTCACGTCCTAGGTTTGAAGCTGCTGGTGGCCATGGGGATCGCCTAAGTA ATGAACGTGACCGCTATGCTGATGATCGTTATGATGGAAGACGTTATGGAGATGGTGGCCGTTATGATGATCGTTATGGCAGCCATGATCGCCATCCCAG TGACAGGTATCCAACAAATGGAGATCGTTTTGGAAGTGGTAGAAATGTTGGTTCAGATCGTTACCCACAAAATGGTCATGGCAAAGATAGAGGTTACGAT CGGCTAGGTGGTCCACGTGGAGCTGCCGCTGATAGATATGGAGGTGGAATACCAGCAAGAGATGAAGGGAGGAATTATAGGAGCAGCAGGCCTGGTCCAT ATGACCGCCCCAGTAGGGGTGCTCCCCCATCTTCATTTGATCGTTACTGATTGTTTACTTTTGGTGAATTTTCTTCTATCCAGATGCAGAAGATACACTA TGCAACTAGTTTTCTCTACGTAGGACATGGAAGTTTCATTGAACAACTAGGTTGTAGTTTCATAGATTATGGATTATATCTTTATTCTGAGCTTGAAAAC CTCTGTTGAGTTCTTTCCTATTTGGATTAATGGCTAGAATTTATAATCTGCGTAGCTTAAATTCCCCTCCCTCATGCATTACAAAAATTTAAATGGCTTA TTAAAAGTAATAATACATGTTTACAGCTACTAATTTATTGTATACAAGCAAACATTACAATAACTTCCACTCCACTATAAATT
• Tissue: pods
• Gene name: LI_gene_158629;
• Additional information: details;

Expression of Ll_transcript_510077

FPKM

• PAB: 0.5
• PNAB: 0.8
• PS1: 0.6
• PS2: 0.7
• PS3: 0.5
• PW1: 0.4
• PW2: 0.5
• PW3: 0.4

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_510077

• Blastp: Glycine-rich RNA-binding protein RZ1C from Arabidopsis with 49.64% of identity
• Blastx: Glycine-rich RNA-binding protein RZ1B from Arabidopsis with 45.56% of identity
• Eggnog: Rna-binding protein(COG0724)
• Kegg: Link to kegg annotations (AT5G04280)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019449815.1)
• Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (PF00076.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;