Ll_transcript_510078

• Id Trinity: TRINITY_DN48158_c1_g1_i13
• Name Transcript: Ll_transcript_510078
• Sequence: GTTTTGGTTGGCCTATATTCTCTTGTTACCTGGTTCCTTTTTTTAAGGGAAAATCAAAATCTGGTTTGTTAGTTGCTAATTTCTGATTTTATACTTTGTT ACATATTGAATTATGGACGAGGATAATCCGGTTCGGCTCTAATCGAATCATAATAAATTGGAAATACGGTTCAGTTTTGGTAAAGAATTCAATCCAAAAA CGGCTAGACCACAGTAACAGGTTGTTCCGGTTCAGTTAACTGGTTAAATTATATGTACTTTTCAGCTTGAGTGTAGTTATTGAGTCCACTTTCACACATT GGTCCTGTCACAGATTTTTCCAAGGTCATTCATTGATGGTGAACCTGGCTGAAAGATTCTCACGAGGTTCTCGACAGACAGTTGTCGGGGAAAATTGGCA TCTATTGGAGATATTTGTGTCTGGAACTTCGGCTCTTTGCAAGCTTCTCTGGTTGATTTGTTGCCAGAAACTTGTGAGCTAGTAATTTCCAATAGATGCC TTATCTGATGCCTCATGGGTTCCTGGAGAAGGAATGTACAAGTTGAGAAACTCTATCATAGCTTGAGCTTCAGCTTGTCATTGCCCGAGCTTCGTCTCTG CTGCCACCTTGCTTTCAGTCCATGGAAGCTTCCCCTGTTCTGTTAACTGTGTTTGTCATTCTTCCACATGCTTTGAAAATTGAATAATGAGCTTCTCCTA TAGTTGAGCCAAATCCAAACCTCTGAAGCATATGAATACGGAGATGCCGTGATTGAGAGAGTGGGACATTAAGGTGTGGTTCGAGTAACTGTAAACCAAA CTTAATCCATGGCAAGAAAACCTCACCTCTTCCATGAAAATAGACTGAACTGTCAACAAGCTGTTTCAACTTGTTTTGTTATTTTCAGCATGGTTCAGGT CCTGTTAAAAGTTCAATTTGTTTTTTTGGTTTTTCTTCCCACCCCCACATTGAAATATTGAATAGAGAAAGATAGTTAAATGTTCATCTATATCATAGTT CTGAAAGGATTGCATGGGGTAAGGAGAGAAATGGTGCTCATCTTGTCAAAAAAAAGAGAGATGGTGTTTATTTGCTTAGAGTAGATGGTGCAGTATATCG ATTTGACTCGGCCTTTGTAAGTCTATCATAATTTCATGTATACTTTCTCTTTGATGATTTTACTTTGAAGCGAGCTATTAAAAGGCAGTCTATCATGAAA TATTTGTGGACAAAAATGACATTGAGTTTTGCATGTGTAGGACATTTTTGTTAGATATCTATTGTTTGTGTGAAGCTTGCCATTTTAAAAGGGTGAGTCT CGATGTAACATTAAGGTTGCTGCATATTGACCAAGAGGTCATGGGTTCAAATCCTGATAACAATCTCTCTGCTTGCGACGGTAAGGTTGCACACTCCCCA GACCCCCACTAAGTAGGAGCCTCATGCAATGGGCTGCCCTTTTATGTATAATGCCTTACTTCATTTTAAACTTAATGTCAGCTTGGAATATTTTAGAAGT GCCTTTCTTTGAATTCATTATGTGGCAATTACACGAGTTCTTTCATGTTCTTGTACTTGGGTACTTATTCCTCCACTGATTAAACTTGTTCTATAAGTTG TGCTCAACCATTATCTTGAATTCTTCCAATAGTTTCTGTTGGTCACATGCATCAATAGCATCGGTGTGTATACCATAAAAAGTGCTGTTAAATTAATGCT AAAAACCTTCCTTTTTAGCAATTATTGTTATTGCTTGGTATGAGATTCTTTAGTGGTTCTCCTGTAGATAATGGTTGAAAGAGATACAGGCCGTCCACGT GGATTTGGGTTTATTACATTTGCTGACCGTAGGGGAATGGAGGATGCAATGAAGGAAATGCATGGACGGGAGCTCGGTGATCGTGCCATCTCTGTCAATA AGGCCCAGCCAAAAATGGGATCTGATGATGCTGACCATGGTTACAGAAGTAGCTATTCATCTGGTGGCAGGGGAAGCTATAGGGTGGGAGACAGGACAGG ACAGGATGACTGCTTCAAATGTGGGCGTCCCGGGCACTGGGCTCGAGACTGCCCTATGTCAGGTGGTGGCCGGGGTGGTGGCGGCTTATTTTCTTCACGT CCTAGGTTTGGAGCTTCCGGTGGCCTTGGGGATCACCTAAGCAATGAACGTGATCGCTATGCTGATGATCGTTATGATGGAAGACGTTACGGAGATGGGG ATCGTTATGATGATCGTTATGGCAGCCATGACCGCCATACCAGTGACAGGTATCCAACAAATGGTGATCGTTTTGGAAGTGGTAGAAATGGCGGTTCTGA TCGTTACCCGCAAAATGGTCAAGGCAAAGATAGAAGCTACGACCGGCTAGGTGGTCCACGTGGAGGTGCTGCCGATAGATATGGCGGTGGAATGCCAGCA AGAGATGAAAGAAGGACCTACAGGAGCAGCAGGCCAGGTCCATATGACCGCCCCAGTCGGGGTGCTCGCCCATCTTCATTTGATCGGTACTGATTTGTTC CCTTTATTGAATTTTATGGGATATCCAGATGCAGAAGGCCCACTATGGACCTAAATTCCTTTTTGGATGATATATGGACCTAGTTTTCTCTACGTAGGGC ATGGAAGTTTCATTGAACAAGTAGATATTAGTTTCATAGATTATGGATTGGTTTGTTTATGTCTTTAATCTGAGCTTGCAAATCTCTGTTGAGTTAATTT CTATTTGGATTGATGGAGAGAATTTATTAATGTTATTGATGTTCCTCTGGGTAGCTTAAATTACCTCCCTAATATGCAGTGCAAAAAGTTAATTGCTTTT TTAAAAATAATGATGTTAAAG
• Tissue: pods
• Gene name: LI_gene_158629;
• Additional information: details;

Expression of Ll_transcript_510078

FPKM

• PAB: 0
• PNAB: 4.6
• PS1: 4.3
• PS2: 2.3
• PS3: 4.7
• PW1: 3.8
• PW2: 6.1
• PW3: 1.7

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_510078

• Blastp: Glycine-rich RNA-binding protein RZ1C from Arabidopsis with 49.82% of identity
• Blastx: Glycine-rich RNA-binding protein RZ1C from Arabidopsis with 43.96% of identity
• Eggnog: Rna-binding protein(COG0724)
• Kegg: Link to kegg annotations (AT5G04280)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019461493.1)
• Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (PF00076.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;