Ll_transcript_510098

• Id Trinity: TRINITY_DN48159_c0_g1_i1
• Name Transcript: Ll_transcript_510098
• Sequence: AAAAAACTAAATTTCAAATGCCTCAAATTGTGGCACATCACAATGCCACTCTTTTTCTTTCTCTTTTTTAATCTTCTCACAATTTCTCTCTCACACACTT TTCTTACAGAAAAAGCTTGCTATTCCATTTCCCTGTGACGTTACTTTGTCTCATTCAAACTCAGCAACTACTCACCCACCTAAATCCAACCCCTTATCCT TCTCATTTAACTCACACACTCAACTCAACTCTTCTTATTTGAATTCAACCCTTTCTACATTCAACAATGTAACATAACACCATTCAAAAAATGCAACTTT AGTTTGCCACTTGTGTAGATCTGAAACACCCGGGATCTAAAAAAGAACAGATTTTGAGTTCTGGGTTTTGTTCTTTTCAGTATTGGGTATTCGAAAAAGC CTTTTTTTCCTGAAAATTTTGGAGACATTGTTTTTCTAAAAAATGGGGTCCAGTGGCAGCAAAGCCACTTCATCTTGTAGTTCATCGTCGTGTTCCGGAA CTTTTCAGAGGGGTCGATCTAAAAGGTATAGAGGGTTTCAATCTTATTGTCTAGGAACAACATCTGGATCTCATGATAGTGATAATGACGAGGTTTGTGA GCAGAATAAAGTAAATGGAAATGATGTTACATACACCAAAGGCAAGGAAAGAGACTCAGATGAAGTGAAAATAGATTCTTTTAGAAAGGTTAAATCTGAT GAAATGTCTTGCATTCCTCCTAAACTCGACTTTGATGAGTGGGGTGACACTGCATCCAGAATCGGCAGCAGCTCTGCCCATGCTTCTTCAACTCAGTCCT TGAACCCTTCAAGTCGATTCTTTTCTCGCTTTAGCCTCATTCCTGGTAATATAAGCTTCAGACTTAGCAGAACTACCAGTTTGAGGTCATCGAGGCCTTG TCCTGTTTCTTCTACAAGCCCTTCAATATTTAACAATGAAGGTGAGCAGAATCTGCATCCACGGCATCCAGCTAGCTTGATTAATAGAAACGAACCTCGA CAAGGTAGTGACCCACTTAATGCATCATTTGTTAATCAAGATCCTATACAGTATCATGAAGATGCTTCTAATAATTTAAGATCTATCGCCTCAGCAGTGG GTTCGCCTTGCAACTTACAGAGAAGTCCAGCAATTTATCCTATCCAGGATGTGGTTACAGATGGAGATGGTACAAGAGAAGTGCTGGATTTGGACTTGTT TGCTCCAAGAATTCATAATGAGTCTGAAAATGTTGAGACTAGACATACTAATAGACGAAATGGAGTTCGAGAACATGTTGAACGTAATGTTAGTTTCAGC AGAACTTTAAGTGTTGGAAGGCTTCGTGACAGAGTTCTCCGCCGATCAACATTATCTGATTTCACCTTTTGCCCTTTGCAACAAGAGAGAGAAGTGAGAG ATGCTCGTCAGGATAATGGAAGACAAGCGGGGGAGAGAGATACAAGAGTTTCACCATCTGGAGATCTTCCATCCACTATGTCTAGATCCTTGTTTACCTT CCAAGACTATGAGGTTGAGACTTCACGATCAAGAGGAACTAGGTATCAGGATCTACTGGAACATAGGTCCAATTTCCTTGAACGGCGAAGAAGAATACGG TCCCAGGTTCGTGCTCTTCAGAGGTTGGGTAGCCGGTTTGAAAATCTTTCTGGACATGAAAGATCATGTATCTTGTCCGGTCAACATAGAAATGGTCATT GTACATGCCGAATCAGCAGTCACGAACGAAGTACCAATTCAAATGATGATACTAATGCCAGTGCTAGTATATCAAGAATTGTTATGTTAGCTGAAGCCTT ATTTGAGGTTCTGGATGAAATTCACCAGCAATCTGTAGTTTTATCTTCTCGTCCGTCCGTGTCTTCTATTGGATCTGTTCCAGCGCCCAATGAAGCTGTG GAATCCTTGCCTGTTAAATTATACACAAAGTTGAACAAACATCAAGAAGATGATGCACAATGTTATATATGCCTTGTGGAGTATGAGGATGGAGACAGCA TGAGAATACTGCCTTGCCGCCATGAGTTTCACAGAACATGTATAGACAAGTGGCTCACAGAGGTTCACAGGTATTGGGGAATTGGGATTGTGTTCTTCTT CTCAGTTAACTAATGGCTAACAAAATTAACTGTTATACATTTAGTCCTGCAAAATTACTGCTGTAATGGATCAATGAATATCTCAGGCTTTGGAACCTTT CTAGTAGGTGGATAGAATACTGAACATAAATGGATAATTTTGTGCTTTATGTATTATAGGCACTCCAATAGTAGATGTAGTGTTTGCAAAAACTAGATAT TAAAACTATATGTTGGCGAGGTAAGGCCGTAAGGGTTGAATATTAGCAAAACTGACTAAATGATGTGCCA
• Tissue: pods
• Gene name: LI_gene_158635;
• Additional information: details;

Expression of Ll_transcript_510098

FPKM

• PAB: 0
• PNAB: 0.2
• PS1: 0.7
• PS2: 0
• PS3: 0.1
• PW1: 0.2
• PW2: 0.2
• PW3: 0

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_510098

• Blastp: Receptor homology region, transmembrane domain- and RING domain-containing protein 2 from Oryza sativa with 42.11% of identity
• Blastx: Receptor homology region, transmembrane domain- and RING domain-containing protein 2 from Oryza sativa with 41.38% of identity
• Eggnog: Ring finger protein(ENOG410Z5DF)
• Kegg: Link to kegg annotations (4344437)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019423632.1)
• Pfam: RING-like zinc finger (PF17123.4)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;