Ll_transcript_510100

• Id Trinity: TRINITY_DN48159_c0_g1_i3
• Name Transcript: Ll_transcript_510100
• Sequence: CATAAATTCAGTTAAAATATTGGAAAAAGTTTTTCTATTTATTGAATAAGATTACATACCTCTATTTCTAGTTTCCCTGTGAAGTTGGCTTGTCTCATTC AAACGCAGCATCATAACACTCAACCCTCCTCATTTTCCCTCACACACTCAACCCTCCTCCTCTTATTTGAAATCGACCCTCTTCTTCACATATAATGCAA CATAACACCATTCAAAAAATGCAACTTTAGTTTGCCACCTCTGTAGATCTGAAACACCTGGGATCTCAAAAAGAACAAATTTTGAGTTCTGGGTTTCATT CTTTGGTGCATTGGGTATTCGAAAAATCATTTTTTTCTTCTGGAAATTTGTGGAGACATTGTCCGGCTCAAAAATGGGGTCCAGTGGCAGCAAAGGCACT TCATCTCGTAGTTCATCGTCGTGTTCTAGTAGTTTCCGAAAGGGTCGATCTAAAAGCCACAGAGGCTTTCAATCTCATTGTTTAGGAACAGCATCTGGAT CTCATGATTGTGATAATGACGAGGTTTTGGAGCAGAATAAAGTAAATAGAAGTGATGTTACATACACCAGTGACAACGAAATAGGCTCGGATGAAGTGAA GATAGATTCTTTTAGAAAAGTTAAATCTGATGAAATGCCTTGCATGCCCTTGAACCTCAACCTTGATGAGTGGGATCACATTGCATCCAGAACCGGCAGC GGCTCTGCCCATGCTTCTTCATCTCACTCCTTGAACCCTTCAAGTCGATTCTTTTCTCGCTTAAGTCTTATTCCTGGTAATATAAGCTTCAGACTTAGCA GAACTACCAGTTTGAGGTCATCGAGGCCTTGTCCTGTTTCTTCTGCAAGCCCCTCAATATTTGATAATGAAAATGAGCTTAATCTGCGCCCATGGTGTCC TGCCAACTTGGTTAATGGAAATGAACCTCAACAGGGTAGTGACTCGCTTAATGCATCTTTTGTTAATCGAGTTCCTGTACAATATCACGAAGATGCTTCT AATAATTTAAGATCTATCACCCCAGCACTGGGTTCGCCTCAAAACTTGCAGAGAAGTCCCGCAATTTATCCTGTCCAGGATGTGGTGATAGATGGAGATG GTACAAGAGAAGTGCTGGATTTAAACTTGTTTACTCCACAAATTCATACTGAGTCTGAAAATATTGAGACTAGACATACTGATAGACGAAATGGAGTTCG AGAACATGTTGAACGTAATGTTCATTTTACAAGGACTTTAAGTGTTGGAAGGCTTCGTCATAGAGTTCTCCGTCGATCAACATTATCTGATTTCACCTTT TGCCCTCTGCAACAAGAAGGAGAATTAAGTGATGCCCGTCATAATAATGGAAGACAAGTAGGGGAGAGAGATACAATAGTGTCACCATCTGATCCTAATG CTGTACGTTCTCCTTCCACATCTGGATATCCTCCATCTACTACATCTAGCTCCTCGTTTACCTTTCAAGAGTATGAGGTCGAGACTTCACGATCAAGAGA AACTAGGTATCAGGATATACTGGAACATCGATCCAATTTCCTTGAACGGAGAAGAAGAATGCGGTCACGGGTTCGTGCTCTTCAGAGGTTGGGTAGCCGG TTTGAAAATCTTTCTGGACATGAAAGATCATGCATCTTGTCTGGTCAACTTAGAAATGGTCGTTGTACATGCCGAATCAACAGTCATGAACATAGTACCA ATTCAAATGATGATACCAATGCTACAGCTAGTATATCAAGAATTGTTATGTTAGCTGAAGCTTTGTTTGAGGTTGTGGATGAAATTCACCAGCAACCTGT GGTTTTATCTTCCCGCCCATCTGTGTCTTCTATTGGATCTGTTCCGGCGCCTAATGAAGTTGTGGAATCCTTGCCTGTTAAATTATACACAAAGTTGAAC AAATATCAAGAAGATGCTGTACAATGTTATATATGCCTTGCCGAGTATGAGGATGGAGACAGCATGCGAGTACTGCCTTGCCGTCACGAATTTCATAGAA CATGTATAGACAAGTGGCTGAAGGAGATTCACAGGGTATGCCCACTATGTCGCGGTGACATCTGTGTATCTGATTCATTGTTGAGGGAGAACTGAAGTGA GAATTTGTTGATCAGAGTTCTTGGGAGGAGTAGTAAAGTATCTCCACATACACTGGTGTGTGATTATTAGAAGTTCATTTATTTTCTGCTAGCATTCATC ATTGCTGTTAATGATTATTCACTCCAGTTACTGAATAAACATTGTAGAAATAGACTGAACTAGTAGCTCCCTCTGCTTCCATAACCAAACCAAGTGAAAG GGAGGGACTATTGTTTAATGAGGAAATGTGTGAACATGTTTCAGAAAAGGTGCTCATGGTATACCCAACATTCTTTTGTTTTCTCCCACAAAAGTAATAG TTAAATGATGGCTTTGCATCTTTTGTGACATTGCAGCATCTTTGACTGAAATAACATAACATTCTCATTGTCTGTAGGCCAGTGAAGCAAGTGTAACATT TGTGCACGCATGTGAATGTGTCATATCCTTTTCACTTTTCAAAGGGAAAAGGGGAGAAAAGAAACATATTAACAGTGTAGGAATAGATGAAAAGTTGACA AGTTTATTGATTAGAAAAAAGTAGTAATAGTAGTAATTTCTGAGTGACTCCTATCCCACCTGAAAGAACAACTAGACTACAATGATTTATGCAACTAGGT TTGTTTTCTTTAAATTTGGAGCAAAAGAGTGGCACTGGATCCCCAAAATTTGTTTTCTTTAAATTCTTCGGCGGACTTCTATTCCATATGTTCCTATCCT GAAATTCAATGCTTCTTATTAAAAAA
• Tissue: pods
• Gene name: LI_gene_158635;
• Additional information: details;

Expression of Ll_transcript_510100

FPKM

• PAB: 4.1
• PNAB: 10.2
• PS1: 4.8
• PS2: 4.2
• PS3: 3.8
• PW1: 3.3
• PW2: 5.7
• PW3: 4.8

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_510100

• Blastp: Receptor homology region, transmembrane domain- and RING domain-containing protein 2 from Oryza sativa with 40.58% of identity
• Blastx: Receptor homology region, transmembrane domain- and RING domain-containing protein 2 from Oryza sativa with 40.58% of identity
• Eggnog: Ring finger protein(ENOG410Z5DF)
• Kegg: Link to kegg annotations (4344437)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019422012.1)
• Pfam: Ring finger domain (PF13639.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;