Ll_transcript_510101

• Id Trinity: TRINITY_DN48159_c0_g1_i4
• Name Transcript: Ll_transcript_510101
• Sequence: ATTGGCCAAAGTTTTGTGGCATTAACTGTTGTTTGTAACTCATGCTTTAGGTTTGTGAGCAGAATAAAGTAAATGGAAATGATGTTACATACACCAAAGG CAAGGAAAGAGACTCAGATGAAGTGAAAATAGATTCTTTTAGAAAGGTTAAATCTGATGAAATGTCTTGCATTCCTCCTAAACTCGACTTTGATGAGTGG GGTGACACTGCATCCAGAATCGGCAGCAGCTCTGCCCATGCTTCTTCAACTCAGTCCTTGAACCCTTCAAGTCGATTCTTTTCTCGCTTTAGCCTCATTC CTGGTAATATAAGCTTCAGACTTAGCAGAACTACCAGTTTGAGGTCATCGAGGCCTTGTCCTGTTTCTTCTACAAGCCCTTCAATATTTAACAATGAAGG TGAGCAGAATCTGCATCCACGGCATCCAGCTAGCTTGATTAATAGAAACGAACCTCGACAAGGTAGTGACCCACTTAATGCATCATTTGTTAATCAAGAT CCTATACAGTATCATGAAGATGCTTCTAATAATTTAAGATCTATCGCCTCAGCAGTGGGTTCGCCTTGCAACTTACAGAGAAGTCCAGCAATTTATCCTA TCCAGGATGTGGTTACAGATGGAGATGGTACAAGAGAAGTGCTGGATTTGGACTTGTTTGCTCCAAGAATTCATAATGAGTCTGAAAATGTTGAGACTAG ACATACTAATAGACGAAATGGAGTTCGAGAACATGTTGAACGTAATGTTAGTTTCAGCAGAACTTTAAGTGTTGGAAGGCTTCGTGACAGAGTTCTCCGC CGATCAACATTATCTGATTTCACCTTTTGCCCTTTGCAACAAGAGAGAGAAGTGAGAGATGCTCGTCAGGATAATGGAAGACAAGCGGGGGAGAGAGATA CAAGAGTTTCACCATCTGGAGATCTTCCATCCACTATGTCTAGATCCTTGTTTACCTTCCAAGACTATGAGGTTGAGACTTCACGATCAAGAGGAACTAG GTATCAGGATCTACTGGAACATAGGTCCAATTTCCTTGAACGGCGAAGAAGAATACGGTCCCAGGTTCGTGCTCTTCAGAGGTTGGGTAGCCGGTTTGAA AATCTTTCTGGACATGAAAGATCATGTATCTTGTCCGGTCAACATAGAAATGGTCATTGTACATGCCGAATCAGCAGTCACGAACGAAGTACCAATTCAA ATGATGATACTAATGCCAGTGCTAGTATATCAAGAATTGTTATGTTAGCTGAAGCCTTATTTGAGGTTCTGGATGAAATTCACCAGCAATCTGTAGTTTT ATCTTCTCGTCCGTCCGTGTCTTCTATTGGATCTGTTCCAGCGCCCAATGAAGCTGTGGAATCCTTGCCTGTTAAATTATACACAAAGTTGAACAAACAT CAAGAAGATGATGCACAATGTTATATATGCCTTGTGGAGTATGAGGATGGAGACAGCATGAGAATACTGCCTTGCCGCCATGAGTTTCACAGAACATGTA TAGACAAGTGGCTCACAGAGGTTCACAGGGTATGCCCACTATGTCGCGGTGACATCTGTGTATCTGATTCATTGTCATCGGAGAACTAAAGTGACAATTT GTTGATCAGCATCTTCTCTAAAACACCCAGAGCTCTTTGAAATAGTGAAGTATTTTCACATACAGTGATGTGACTGTTAGAAGAAGTTCAGACATTTTCT GCTAGCATTCATCATTGTTGTCAATGATCATTTACTCCAATTTCTGAATAAACATGAAACCATTGTAGAAATAGACTGAACTAGTAGCTCCCTTTGCCTG CATCACCAAGTGAAAGAGAGGGGCTATTGTAAAAGGTGCTAGTGGTGTATCCAACATCCTTTTTCTTTTGCCACATTTTTGTTGTTATGCTAACACAAAA GTATCAGTTAAATATGTGCTTTTCATCTTTGGTGATATTGCAGCATCTTTGACTGAAGCAACATAGCATTCTCTTTGTCTTTTAGACCAGTCAAGCAAGT GCATGAAAACAATAAACATTTGTGCATGCGTGTGATTTCCTTTTCACTTTTCAGAGAAAAAAGGGTAAGAAACATATTACAGTGTAGGAATATATTAAAG GGTATTGTTAACTAGTCCCCTATGGAACTTGTTAAGAAAAATAATATTATAAAACTAAG
• Tissue: pods
• Gene name: LI_gene_158635;
• Additional information: details;

Expression of Ll_transcript_510101

FPKM

• PAB: 0
• PNAB: 0.2
• PS1: 0.8
• PS2: 1.3
• PS3: 1.1
• PW1: 0.4
• PW2: 0.6
• PW3: 0.9

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_510101

• Blastp: Receptor homology region, transmembrane domain- and RING domain-containing protein 2 from Oryza sativa with 40.58% of identity
• Blastx: Receptor homology region, transmembrane domain- and RING domain-containing protein 2 from Oryza sativa with 40.58% of identity
• Eggnog: Ring finger protein(ENOG410Z5DF)
• Kegg: Link to kegg annotations (4344437)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019423632.1)
• Pfam: RING-H2 zinc finger domain (PF12678.6)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;