Ll_transcript_510454

• Id Trinity: TRINITY_DN48161_c0_g2_i2
• Name Transcript: Ll_transcript_510454
• Sequence: ATGAAATATTCTTTCACATGAAAGACACGATCCTCTCCTTCATTGTTTATTCTCTTCCGTTGTTCCCGTCTCTCTTCTCCGCGTCCTTTCTCTCTCCTCT TCTTTCTTTCCCCTCTCCATCATTTCATTACCGATTCTCTTCAATTATTCCTTCCTTCATTTTCTTTCAACGAGTTGATTTTGGGGGTGTTCTTTATATG CTAAATTAATCTCTGAAGGTTGAAAGATGCAAGCTTTTATTTGATGGTAATAAGGATTAATTTGCATCAACAAATCTCTACAATATGGATCAGATGACGG ATACGGAAATGGATCAACAGAATCAAGAATATTTACGTTCTGAACCCTGTATCGTTTTGAGAGGCTCCACAAGTACCTCACAGCCAAATATCCGCCCAAT GGTGGCAGCTTCAGGGAACACAACTAATGTTGATTCTTACTATTTACAGGATGCTTATGACAATTACAGGTTGTACGGGTTGGCACAATACAATGCCGTT CAGCATCAACATAATCTTGACATGGCTGGTGCAACCGCAGCCAACATATATTATTCTGGCATGAATCCTTCTTCTAGTAGTGGTGTATTTACCCCTTTGC CTCTAAATCACCGAGGCTCTGATCAGTTGCCAGGTTCAAACACATTTGCAGTATCTGGAAGTTCTTCAGATAATTTTGGAAGAAGCAGCGGTTTCATGGA CGATGTCAGAGGTCCGTACAAAAGGAAAATTGCTGAAGGGGTCAGAGGAAATCACCAGTATGTTAATGCTTCAGCTAGTTCTTCCATTGCTCCCCCGAAT GCAAGACACGCTGATGGGGTCGCTATGATGGATACTGCATCATATTCCTTGCACATGCCTTCACTTGTGGAAGTAGGACCACATGGTAGTGCATGGAACA GATCAGGTGAGTCTATTATGGTGCATGACCGCAACAGTGTGATTCGTGGAAGCTATTTAGGTCAGCTCTTTCAGGCAGCTCCTCCTCCCTGGTTTGACCA GCAGCTGAACAATGATGGCCATACTACAGCCTGGAATCAGCCTCTTCCGATGCCTTATATGCAAGCACCGAATGTTAATGGAAGTTCATTAGAGAATGCA AGTATGGGTCTGCAGAGATATCCCGTCACAGCCAGCAACAGAAATGGCCTAAGGTTTCGTCACCCCCCTCCTGTGAACCACCCACATCATAATTATCATC ATCCAGCGCTACCTATGCAAGGAGTGAGAGGTCACAATATCATCTTTCATCCTCCTCCTGTAACTGCAGCTTCATTTAGAGTTCCTACAAATCCTTCACG CAATGCCGCAATCCCCACACAGGCTGGTTATGAGATGGTTCCTAGGCATTTTGGCCCTGTGCCGCCAGAAGGCCTTCAGATATACCGACCTCACAGAGCA ATCATGCCCGATGCAACTCTCAGACATAGAAATCTTGCCCCCATGGGATTTCTTCAAGTGGATGATGTTGCTTTAATTGATGAAGTGAGAAATCCGGTTG ATCATCACAGAGATATGCGTTTGGACATCGAGGATATGTCTTATGAGGATCTTCTTGCATTGGGTGATCGGATCGGCAAAGTAAGCACTGGCTTATCAGA AGAAACAATCACAGCTCAATTGAAGATGAAGACTTATGTAACTTATGCCGCTGCTATTAATTTGGAGGAGCCAGCTTCTGAAGACCAGGAATCTGATTCT TGTATAATATGTCAGGTATGCGCTTTTACCAACGCCTTTCATTCAATTTTTCATTTGATGGAAAATCGAGAATTGCCACATCCAATGGAAATGAGATTAG TAAATATAAAGCTTGGAGTGCATAAGTCCAAATGACCATACGATATGCATTTTGGACGAAGTAGCAACTCTGTAGCACAATCGAAAACCAGCTTGCTCTG CCATATTGCAAGACTTGGACAAGGCCGATTCTAACTAGTTATTTCGGCATTCATATTTCATATATACCAAACTTTCTAGGATTCTCTTGCCTTAGTACCT TTGGTGTACTTATGAATTATATACCATATTAATTGGTCTAGCTTTCGTATATAATTTCACAGGACGAATATAAAGACGA
• Tissue: pods
• Gene name: LI_gene_158643;
• Additional information: details;

Expression of Ll_transcript_510454

FPKM

• PAB: 0.3
• PNAB: 0.4
• PS1: 0.5
• PS2: 0.7
• PS3: 0.1
• PW1: 0.5
• PW2: 0.5
• PW3: 0.1

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_510454

• Blastp: Probable E3 ubiquitin-protein ligase ZFP1 from Oryza sativa with 29.14% of identity
• Blastx: Probable E3 ubiquitin-protein ligase ZFP1 from Oryza sativa with 38.1% of identity
• Eggnog: zinc ion binding(ENOG41121N2)
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019456828.1)
• Pfam: -
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;