Ll_transcript_510459

• Id Trinity: TRINITY_DN48161_c0_g3_i5
• Name Transcript: Ll_transcript_510459
• Sequence: ATTTTTGTTGCCCATGAAAGACACGATCCTCTCCTCCTTGTGCATTTTCTCCTCCTTTGTTTCTCTCTCTTCCCTGTGTTCTTTCTCTCTCCTCTTCCCT GTCCACCCTTCCGTTACCGATTGTGATCAATTTCTGCATCCTTCAGTTTCTTTCAACGGTAATTGGGGGTTTCTCCATCAAAGTTTAAACTTTTTTGCTG CAAACTCTGTTTTTTGTGGCAATCTAGGGTTAAATTATCTCCATTTTCCTTTTTTCCGATGAAAGGAATGAACTTGCATTCTTGGGTCGTCACCACATTC ACCGGATTATAATTTATGAGTTTTTTCTTTTAACCCCAGTAATAAATTTGACTTGTTAATGTAGAAAAGGTTAAAATTTTATTTTGTTGTGAATTTTCAA CAGAGTTGATTTTGGGGGTGTTCCTGGTATGTTATATTAGTCTCTGAAATTTGGAAGCTGCAAGCTTTTGTTTTGATGATAATAAGGATTAATTTACGTC AACAAATCTCTACACTATGGATCAGATAACGGATTCTGAAATGGATCAACGGAGGCAAGGATATTTCCATTCTGAGCCCGGTGTTGTTTCGAGAGGATCC GCGAGTATCTCACAGCCGAATATCCGCACAATGGTGGCAGCTTCAGGGACCACAACCAATGTCAATTCCTACTATTTACAAGATTCTCATGACAATACTG GGGTGTATGGCTTGGCACAATACAATGGCATTCAGCCTCAACATAATTTTGACATGGGTGGTGCTGCTGCAGCCAACATATATTATTCCGGCATGAATCC TTCTTCTAGTACTGGCGTATTTACCACTTTACCTCTAAACCACCAAGCCTCTGATCAATTGCCTGGTTCGAACACATTTGCGATCTCTGGAGGTTCTTCA GATAGTTTTGGAAGAAACAGCAGCTTTGTGGATGATGTCAGAGGTGCATACAAAATGAAAATTGCTGAAGGGGTAAGAGGAAATCATCAGTATTTTAATG CTTCAGCTAGTTCTTCCGTTGTGCCCCCTAATGCAAGACATGCCGATGGGATTGCTATGGACACTGCATCATTTTCCTTGCACAGGCCTTCACTTGTGGA AGTAGGACAGCATGGTGGTGGATGGAACAGGTCAGGTGAGTCTATTATGATGCATGACCAAAACCATTTGATTCGAGGAAACTACTTAGGTCAGCACTTT CCGCCAGCTCCTCGTCCATGGTTTGACCAGCAGTTAAACAATGATGGCCATACTACAGCCTGGAATCAGCCTCTTCCAATGCCTTATATGCAAGCACCAA ATGTTAATGGAAGTTCATTAGAGAATGCAAGTATGGGTTTGCAGAGATATCATGATACAGCCAACAACAGAAATGGTCTCAGGTTTCCTCATCCCCCTCC TGCCAACCACCCACACCATAATTATCTTCATCCGCCACTACCTATGCAAGGAGTGAGAGGTCATGCTATCAACTTTCACCCTCCGGCAACTGCAGCTTCA TTTAGAGTTCCTACAAATCCTTCACGAGGTGCTGTGATCCCCCCACAGACTGGTTTTGAGATGATACCTAGGCATGTTGGTCCTGTACCGTCAGCAGGCC TAAGGATATACCGACCTCACAGATCAATCATGCCCGATACAACTCTCGGACATAGAAATCTTCCCCCCATGGGCTTTCTCCGAGTTGATGATGGTGCTTT AATTGACGAAGTGGGAAATTTGGTTGACCATCACAGAGATATGCGCTTGGACATAGAGGATATGTCTTATGAGGATCTTCTTGCTTTGGGTGAGCGGATT GGCAAAGTAAGCACTGGTTTGTCAGAGGAAACAATTTCAGCTCAATTGAAGACGAAGACTTATTTAACACATGCTACCGCTATTAATTTGGAAGAGGAAG TTTCTGATGATCAGGAATCTGATTCTTGTATGATATGTCAGGATGAATATAAGGATGAAGAGAAGATTGGAGTTCTTCGATGTGAGCATGAGTATCACGC AGATTGCTTAACGAAATGGTTGCTCGTAAAAAATGTCTGTCCTATATGCAAATCAGAAGCCTTGACCCCTGAAATGAAGGACATAGAGAAATGAATGTAG CCTATATCTCTTTCTCATCCTCCCTATGCCAATCTTGGCTAATTTATTTTTGAACAGAATTCACATTTTGTTGTGTCTTTTTTGTAAATCTACTTGCACA TATATAGACAGTTACAGTGTCCAACTCATTTACTGTTGGCATCAGAACTTTTGTATGTATGAATTTGTACAGACTTTGTTTTGTTTGGTGTATTAACTTC AGGTAATTACACTATTACTGTTTATGATTTATTATTTTGATTGATATTTATGGTTGGAACTTTGAAGTGTCATGATTAAAAAA
• Tissue: pods
• Gene name: LI_gene_158644;
• Additional information: details;

Expression of Ll_transcript_510459

FPKM

• PAB: 0.7
• PNAB: 0.7
• PS1: 0.5
• PS2: 1
• PS3: 0.5
• PW1: 0.8
• PW2: 0.8
• PW3: 0.2

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_510459

• Blastp: Probable E3 ubiquitin-protein ligase ZFP1 from Oryza sativa with 29.39% of identity
• Blastx: Probable E3 ubiquitin-protein ligase ZFP1 from Oryza sativa with 38.76% of identity
• Eggnog: zinc ion binding(ENOG41121N2)
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019425908.1)
• Pfam: RING-H2 zinc finger domain (PF12678.6)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;