Id Trinity | TRINITY_DN48161_c0_g3_i7 |
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Name Transcript | Ll_transcript_510464 |
Sequence | ATTTTTGTTGCCCATGAAAGACACGATCCTCTCCTCCTTGTGCATTTTCTCCTCCTTTGTTTCTCTCTCTTCCCTGTGTTCTTTCTCTCTCCTCTTCCCT GTCCACCCTTCCGTTACCGATTGTGATCAATTTCTGCATCCTTCAGTTTCTTTCAACGGTAATTGGGGGTTTCTCCATCAAAGTTTAAACTTTTTTGCTG CAAACTCTGTTTTTTGTGGCAATCTAGGGTTAAATTATCTCCATTTTCCTTTTTTCCGATGAAAGGAATGAACTTGCATTCTTGGGTCGTCACCACATTC ACCGGATTATAATTTATGAGTTTTTTCTTTTAACCCCAGTAATAAATTTGACTTGTTAATGTAGAAAAGGTTAAAATTTTATTTTGTTGTGAATTTTCAA CAGAGTTGATTTTGGGGGTGTTCCTGGTATGTTATATTAGTCTCTGAAATTTGGAAGCTGCAAGCTTTTGTTTTGATGATAATAAGGATTAATTTACGTC AACAAATCTCTACACTATGGATCAGATAACGGATTCTGAAATGGATCAACGGAGGCAAGGATATTTCCATTCTGAGCCCGGTGTTGTTTCGAGAGGATCC GCGAGTATCTCACAGCCGAATATCCGCACAATGGTGGCAGCTTCAGGGACCACAACCAATGTCAATTCCTACTATTTACAAGATTCTCATGACAATACTG GGGTGTATGGCTTGGCACAATACAATGGCATTCAGCCTCAACATAATTTTGACATGGGTGGTGCTGCTGCAGCCAACATATATTATTCCGGCATGAATCC TTCTTCTAGTACTGGCGTATTTACCACTTTACCTCTAAACCACCAAGCCTCTGATCAATTGCCTGGTTCGAACACATTTGCGATCTCTGGAGGTTCTTCA GATAGTTTTGGAAGAAACAGCAGCTTTGTGGATGATGTCAGAGGTGCATACAAAATGAAAATTGCTGAAGGGGTAAGAGGAAATCATCAGTATTTTAATG CTTCAGCTAGTTCTTCCGTTGTGCCCCCTAATGCAAGACATGCCGATGGGATTGCTATGGACACTGCATCATTTTCCTTGCACAGGCCTTCACTTGTGGA AGTAGGACAGCATGGTGGTGGATGGAACAGGTCAGGTGAGTCTATTATGATGCATGACCAAAACCATTTGATTCGAGGAAACTACTTAGGTCAGCACTTT CCGCCAGCTCCTCGTCCATGGTTTGACCAGCAGTTAAACAATGATGGCCATACTACAGCCTGGAATCAGCCTCTTCCAATGCCTTATATGCAAGCACCAA ATGTTAATGGAAGTTCATTAGAGAATGCAAGTATGGGTTTGCAGAGATATCATGATACAGCCAACAACAGAAATGGTCTCAGGTTTCCTCATCCCCCTCC TGCCAACCACCCACACCATAATTATCTTCATCCGCCACTACCTATGCAAGGAGTGAGAGGTCATGCTATCAACTTTCACCCTCCGGCAACTGCAGCTTCA TTTAGAGTTCCTACAAATCCTTCACGAGGTGCTGTGATCCCCCCACAGACTGGTTTTGAGATGATACCTAGGCATGTTGGTCCTGTACCGTCAGCAGGCC TAAGGATATACCGACCTCACAGATCAATCATGCCCGATACAACTCTCGGACATAGAAATCTTCCCCCCATGGGCTTTCTCCGAGTTGATGATGGTGCTTT AATTGACGAAGTGGGAAATTTGGTTGACCATCACAGAGATATGCGCTTGGACATAGAGGATATGTCTTATGAGGATCTTCTTGCTTTGGGTGAGCGGATT GGCAAAGTAAGCACTGGTTTGTCAGAGGAAACAATTTCAGCTCAATTGAAGACGAAGACTTATTTAACACATGCTACCGCTATTAATTTGGAAGAGGAAG TTTCTGATGATCAGGAATCTGATTCTTGTATGATATGTCAGGTATGATCTTCTACTAATACGTTTTTTCAATTTTTTATTGATGGAAAATCTATAAGTCC CACATCGGTTGGAAATGAGCGAAGTAATGTAAATATAAAGCTCGAAGTGCAGAAGTCCAAATGGGCGTACACATTTTGGACGAAGTAGCAACACTCTAGC ACAATTAACCTCCTTACTCTGTCAAATTGCAAGACTTGGACCCGGCCCATTCTAGATTTCGTAAATATTTCAGTTATGCTGGCATTCATATTTCGTATAA ACCAAGCCTTATGAGTTTGTTCTGCCTTAGTGCCTTTTTTGTACTTACGAATTATATTCCCTATTAATTGCGCTGTTTGTATATATTTTCGCAGGATGAA TATAAGGATGAAGAGAAGATTGGAGTTCTTCGATGTGAGCATGAGTATCACGCAGATTGCTTAACGAAATGGTTGCTCGTAAAAAATGTCTGTCCTATAT GCAAATCAGAAGCCTTGACCCCTGAAATGAAGGACATAGAGAAATGAATGTAGCCTATATCTCTTTCTCATCCTCCCTATGCCAATCTTGGCTAATTTAT TTTTGAACAGAATTCACATTTTGTTGTGTCTTTTTTGTAAATCTACTTGCACATATATAGACAGTTACAGTGTCCAACTCATTTACTGTTGGCATCAGAA CTTTTGTATGTATGAATTTGTACAGACTTTGTTTTGTTTGGTGTATTAACTTCAGGTAATTACACTATTACTGTTTATGATTTATTATTTTGATTGATAT TTATGGTTGGAACTTTGAAGTGTCATGATTAAAAAA BLAST |
Tissue | pods |
Gene name | LI_gene_158644; |
Additional information | details; |
PAB | abscising pods |
PNAB | non-abscising pods |
PS1 | seeds stages 1-3 |
PS2 | seeds stages 4-6 |
PS3 | seeds stages 7-8 |
PW1 | pods wall stages 1-3 |
PW2 | pods wall stages 4-6 |
PW3 | pods wall stages 7-8 |
Annotations of Ll_transcript_510464
Blastp | Probable E3 ubiquitin-protein ligase ZFP1 from Oryza sativa with 34.66% of identity |
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Blastx | Probable E3 ubiquitin-protein ligase ZFP1 from Oryza sativa with 39.23% of identity |
Eggnog | zinc ion binding(ENOG41121N2) |
Kegg | - |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019425908.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |