Ll_transcript_509498

• Id Trinity: TRINITY_DN48163_c0_g1_i14
• Name Transcript: Ll_transcript_509498
• Sequence: CTGTACTGTCGAGATAAAGGAAAAGAAACAAAAATTAAGGTCAGTGCTTCAAACTTGGGAAAAAACAACATCAACAATGGCATCAAAGCCACGAAAAAGA CTCTCTTCAACACAAACCTCAACCATACCTTCTTCATCTGAAAAAGAAAACAACAAGAACAACAATACACAACAACACAAACCCAACAACAACAACAGTT CTTCTGATTCTCCAATTGCACCTCCCAAATGGGGTCTAATTTTCAAGCTCTCACTTTTCTCTATCCCACCATACTTGTACCTTCTCTTCTACCATTACCC AATCGAACAAGACATTCGAAGATCCGTCCTCATTAACGCTGTTATGAGTCTTGCTGGGTTCTTTCTCACTGTTAAATTGATCCCAGTTGCTTCCAGATAT GTTCTTAAGCGAAACCTCTTTGGTTATGATATTAACAAAAAGGGTACGCCGATGGGAGATGTCAAAGTGCCTGAATCTTTGGGTATAGTTGTTGGCATTG TCTTCTTGGTTGTTGCAATCTTATTTCAATATTTTAACTTCACAGAAGACTCAAATTGGCTAGTTGAGTACAATGCGGCATTAGCATGCATCTGTTTCAT GATGTTACTTGGTTTCGTTGATGATGTCCTTGATGTCCCATGGAGAGTAAAATTATTACTCCCATCAATTGCTGCACTACCTCTGTTAATGGCATATGCT GGACATACAACTATAGTTATACCGAAGCCACTTGTCCCACACATCGGGGTAGAGGTTTTGGATCTTGGATGGATTTATAAACTATATATGGGACTATTGG CTGTTTTCTGCACAAATTCAATCAACATACATGCTGGACTAAATGGCCTTGAAGTTGGGCAGACAGTGGTTATCGCATCAGCGATCCTGATACACAATAT TATGCAAATTGGAGCATCAAGTGATCCTGAATATAAGCTAGCACATGCATTCTCTATTTACTTAGCTCAGCCTTTACTAGCTACATCTTTGGCTTTACTT TCTTACAACTGGTATCCATCTTCAGTTTTTGTTGGTGACACGTATACCTACTTTGCTGGAATGACTATGGCTGTGATTGGTATTTTAGGCCATTTTAGGT ATATCCTTAATCTGACAAAAGTTTTAAGCTGGCTATCTTCTTTGGGTGTGTTTCAGTGCTATCAAGATTATATACGGGACTTCAGAAATTTTGCACCTCT GGTTTTATTTTTCTGTTCTAAAGGATCAATTTTGGAGATGAAGTATATGGCTAACCACTTTTATAAGTTGAAGCTTGCTAGTAAATGTTTCTTTTGCTGG CATGGCTTGTATTTTTCCATTTATCTAAGAGTACTTTGGATTAATGACTGTGCATCATTTTATAAGAAAACCTACCAACTAGAACTATTGTTTTAATCTT CAATTCTTATCTCTTTTTGTTGAAAAGAAATCACATTTTAGAATAAATTTTGGCTTCTTAATTTTGTTATCTGTGATGTTTTAAGCAGTTTTTTATTTTA AGTTTAACCATCATCATCTTCTAATCATTTGCAATGTCAACAGAGATTCTGTTGTCCAGTGATAATTATTATATATACATATTGGAGGGAGGACACAGAA CAAAAATCACTTTGATGTTTGTTTTTAATTAAATTTTATTTGTCTCAAGTTAACATGATGTGGTCCAATTCCGGTGGCTGTATAATGTAGTCAAGGAACT GGTAAGGAGGAAATTAAATCTGCCTTCATAATACAAATATGACATGTGTGACAAAATTGAAAGTTAAAAAATACATGGAGGGAAAGTACAAACTGGACTT AATATTTGTCAGTCTTAGTTTAGTTTTTCCTTGGCATCATCTACACATTGAAAACTCAAAATCCCTGCTGCTTACACGGAAACTTGCGGCTTCTATTAAG TATTTACCATGGGCAAATAGGCAAATATGATGCCGAATTTGCAATATTAACCTCCCAATTATACTTCAAATGCATATAAGGTAGTTTGGGCTGGTAATTT TGCATGAAAAGCTTATATACAGTCAAGGAAACTTCTTTTTCTGTTCTAATCTGTGGATTACATTTTTTCCTGAGGGCTCTTCTTTATGTTCCTATTCCCT TTGACCATTTCTTTCTCCCATAAAATATATAACTGTTGTACTTGAGTAAAGTATAACTACAAAAGAAAAAACTTAATCTGACTCAAGTTTTATCAAATAT TAAAAGGTAAGCATTTAGCAGATGACCTGATTAGCCATCGAGCAGGATAAAAACAGTAGTATAAAGCTTATGTTTGTGCATTTGTATCAGTTCATTCCAC TGAGAGCTTGGCATATTAAATTGCATTCTAATAATTTTATTCTCTTTCTATTTTTGCTTCAGTGAAACACTCTTGATTTTCTTCGTACCTCAAGTTTTGA ACTTTCTCTTTTCACTCCCCCAGCTTTCCGGCTATGTTCCATGTCCTCGTCATCGACTGCCAAGGTTTGACCCTGAAACTGGACTACTGACTGGGACAAA GGATGGGACACTCGTTAACCTGTCCTTGAGATTTCTAGGCAGGAAGTCCGAAAAGGCACTTTGTATTTATCTTCTTGGTTTCCAGGTGATTTCGTCTTCC CATTTTTCCCTCTTGCCTGTATTGATGTCTGATTCAAGCAAATCAGTGTAGTTCATGGGTCCAAGTATAACTTCACAGATAAAAGTGAACATGGCCTCAT TTGATTTAGGAATCGTGCTAAGAATTTACCTAAATGGCTAAAGTTGCTCCATCTGTGAGTTAGGTTTTTGAGGGAAAGAAAGGAAAGGGAAAACATGGGA GCTGTAAAATATATTTGTGAGATGGCTCTAAAGCCTTTCCTTGCGCTTCATTCCTTTCTAAAACTCATCTCGCAAACAAATCGTTAAAGGTCAATTATTT TTTATTTCCTTAATGGCTTAATATTTTAATGTGTATGTAATTGATTTGACATGCTTCATGAGGACTTGCATTCTAATTTCAACTAACTGTCAAACACACA CATATATTTTAAAATAAATAAGGCCTACCATAAACATTATTATGAGATTTGGGTACTGCATATTTGCACATTTTAAACAAGACAATTATTACAAATAACA TTTTTCAAGCAATATATCATTTTACGTAATCAAATATCCCCCTACCCACAATAAAATGACATGTCACTTGTAAGCTAATTTTTATAACAAAGTATCACTT TGTGACACATTTTACTTTTTTTTATGCCATAGGAGGATATATATTTTCATTTTAACCTATAATTTTGATGCCGATACTTTTACTGGATGGATACCATTGC AGTCGAAATGTTGAAATCTTTGCATATATTTTATCTTCTTTTTGGCAGGCCATTGCATGCTGTCTCTGTTTCTTGCTGAGGCATTTCCTTGCTGGGTGGT ACAAATGAAATCACCAAACTGAAAACAAATATAGATGTAAACCTCCCTCGAGGCTGAATCTGTTGTATTGATATTTTTGTAGAAAAACTGTCTAACATTT TCCTCTCGAGGCCTTGAATGTCTAACATTTTTGCATGCCACCCTTTTAACACGACATTCTTTTTAATTTTGTCACTACTGGAGTTAATATAAGTTAACTG GTATTAAAATTAGAGAATAAAGTATTTCCTTGTACTAGGAGATAACTTATCTCCTTTACTCTATTCACTGCATGATATATGTCTTGTTTCT
• Tissue: pods
• Gene name: LI_gene_158652;
• Additional information: details;

Expression of Ll_transcript_509498

FPKM

• PAB: 0
• PNAB: 0
• PS1: 0.3
• PS2: 0.2
• PS3: 0.2
• PW1: 0
• PW2: 0.2
• PW3: 0.3

Labels

• PAB: abscising pods
• PNAB: non-abscising pods
• PS1: seeds stages 1-3
• PS2: seeds stages 4-6
• PS3: seeds stages 7-8
• PW1: pods wall stages 1-3
• PW2: pods wall stages 4-6
• PW3: pods wall stages 7-8

Annotations of Ll_transcript_509498

• Blastp: UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase from Dictyostelium with 49.52% of identity
• Blastx: UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase from Dictyostelium with 47.91% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019426509.1)
• Pfam: Glycosyl transferase family 4 (PF00953.20)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;